Avibacterium volantium: NCTC3438_01574
Help
Entry
NCTC3438_01574 CDS
T06626
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avt
Avibacterium volantium
Pathway
avt03420
Nucleotide excision repair
avt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC3438_01574 (uvrD)
03430 Mismatch repair
NCTC3438_01574 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avt03400
]
NCTC3438_01574 (uvrD)
Enzymes [BR:
avt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC3438_01574 (uvrD)
DNA repair and recombination proteins [BR:
avt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC3438_01574 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC3438_01574 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
VEB24544
UniProt:
A0A447SRZ5
LinkDB
All DBs
Position
1:complement(1598922..1601108)
Genome browser
AA seq
728 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTFRIAWLIAVEQISEGSIMAV
TFTNKAAAEMRHRIEETLAKYSSQRVMGMWIGTFHSIAHRLLRAHYADAGLPQDFQILDS
DDQLRLVKRLIKLHNIDENAYPPKQACWYINNKKEEGLRPHQLDDDGDIQERTWIKIYQI
YQDACDRAGLLDFSELLLRAYELWLKKPLILQRYQQRFSQILVDEFQDTNKIQYAWIKLL
VGETGKIMIVGDDDQSIYGWRGAQVENIHRFLEDFHNAQTIRLEQNYRSTANILNSANHL
IANNSNRLGKDLWTEGEQGDPVGIYAAFNEIDEAQFVANQIKIWLDDGGKLDDCAILYRS
NSQSRVIEEALIRAQIPYSIYGGLRFFERQEIKDALAYLRLIANRFDDAAFERVINTPTR
GIGDRTLDVLRQLTRERQITLWQAIQVAIQENMLAGRAATALLRFTELINSLQQETAEMP
LFAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVSATREFIKPEDAEEMTDLMAFLT
HASLEAGEEQASPHQSSVQMMTLHSAKGLEFARVFMVGVEEGIFPSFRSFEEPGRLEEER
RLAYVGITRAKQKLTISYAESRRLYGKEERHLPSRFIEELPEDCIQEVRLRGTVTRAYNR
AAVGSLNTHKSGKDSEWRMGQKVKHGKFGNGTIINVEGEDNNTRLQIAFQGEGIKWLIAA
LAKLEKLS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctgaattacttgatggtttaaacgataaacaacgtgaagcggtggctgcg
cccttaggcaattatttagtactagcgggcgcgggtagcggtaaaacgcgggtgctgact
tttcgcattgcttggctgattgctgttgagcaaatctctgaaggaagcataatggcggta
acctttaccaataaagccgcagcagaaatgcgccatcgaattgaagaaactttggcgaaa
tattcatcacaacgtgtaatgggaatgtggatcggcacatttcacagcattgctcaccgc
ttattgcgcgcccattatgccgatgcagggctgccgcaggattttcaaattttagacagt
gatgatcaactacgcttagttaaacgcttgattaaattgcacaatattgatgaaaacgct
tatcctccgaaacaagcgtgctggtatatcaacaacaaaaaagaagaaggtttgcgaccg
catcaacttgatgatgacggtgatattcaagaacgtacttggattaaaatttatcaaatt
tatcaagatgcttgcgatcgcgcaggtttgttagatttttctgaattattgcttcgtgcc
tatgaattatggctgaaaaaaccgttgattttgcaacgttatcaacaacgcttttcgcaa
attttagttgatgagtttcaggataccaacaaaattcaatatgcgtggatcaaattattg
gtaggggaaacgggcaaaataatgatcgtgggtgatgacgatcagtctatttatggctgg
cgtggcgcgcaagtagaaaacattcatcgttttttagaagattttcacaatgcacaaacc
attcgccttgagcaaaattatcgctctacggccaatattctcaatagcgcaaaccatttg
atcgccaataacagcaaccgtcttggtaaagatttatggacagagggtgaacagggcgat
cctgtgggaatttatgccgcattcaatgaaattgacgaagcgcagtttgtggcaaaccaa
attaaaatctggctcgatgatggtggaaagctagatgattgtgccattttatatcgtagt
aatagccaatcgcgcgtgatagaagaagccttgattcgtgcgcaaatcccttatagcatt
tatggtggattacgcttctttgaacggcaagaaattaaagatgccttagcctatttgcgt
ttaatcgccaatcgctttgatgatgccgcctttgaacgtgttatcaacacgccaacacga
ggtattggcgatcgcaccttagatgttctgcgccaattaacgcgtgagcgacaaatcacc
ctatggcaagccattcaagttgccattcaggaaaatatgctggcaggacgtgctgccact
gccttgttgcgctttaccgaattaattaattccttacagcaagaaacggcggaaatgcct
ttgttcgcgcaaacggattttgtcatcaaacattcaggcttatatgaaatgtataagcaa
gaaaaaggcgagaaaggcgaagtgcggatcgaaaacttggaagaattagtcagcgccacc
cgagaatttatcaagcctgaagacgccgaagaaatgacagacttaatggcatttctcact
cacgcctctttagaagcaggggaagagcaggcttcaccacatcaatccagcgtgcaaatg
atgaccttgcattctgccaaagggctagaatttgcccgtgtttttatggtgggcgtagaa
gagggaatattcccgagtttccgttcctttgaagaaccggggcgtttagaagaagaacgc
cgtctggcttatgtggggattacccgagccaaacaaaaactgaccattagctatgcagaa
agtcgccgcttatatggtaaagaagagcgccatttgccttcacggtttattgaggaactg
ccagaagattgcattcaagaagtgcgtttacgcggtacggttacccgtgcctataaccgc
gcagccgtgggatcgctaaatacgcataaatcgggcaaggatagtgaatggagaatggga
caaaaagttaaacacggcaaatttggaaatggcacaattattaatgtggaaggtgaagac
aacaatactcgcctacaaattgctttccaaggcgaaggcatcaaatggctcattgccgcc
ttagcgaagctagaaaaactctcctaa
DBGET
integrated database retrieval system
