Avibacterium volantium: NCTC3438_01778
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Entry
NCTC3438_01778 CDS
T06626
Symbol
capD
Name
(GenBank) UDP-glucose 4-epimerase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
avt
Avibacterium volantium
Pathway
avt00541
O-Antigen nucleotide sugar biosynthesis
avt00552
Teichoic acid biosynthesis
avt01100
Metabolic pathways
avt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCTC3438_01778 (capD)
00552 Teichoic acid biosynthesis
NCTC3438_01778 (capD)
Enzymes [BR:
avt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
NCTC3438_01778 (capD)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
PglD_N
GFO_IDH_MocA
NAD_binding_4
adh_short
CoA_binding
KR
CoA_binding_3
Motif
Other DBs
NCBI-ProteinID:
VEB24915
UniProt:
A0A447SSM0
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Position
1:1835004..1836494
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AA seq
496 aa
AA seq
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MLLSHNKDSRTKVLIYGAGYSGRQLLTALNQSSHYSVIGFIDDNKALHKTILHGITVYSP
KSLGKLIDNKNIKKILLAMPSATQSQRKAIINRISKYKCEVLTIPGMEDIVSGKAHLTSL
NQVSISDLLGRDPVTPIESLLAQDIKNKIVMVTGAGGSIGSELCRQIIKQSPKKLILFEL
NEFSLYQIHQELLKNADFQHVELIPLLGSVQRKHRLDIIMRSFKVETVYHAAAYKHVPLV
EYNVVEGIRNNIFGTLYCAQAAIEAGVSTFVLISTDKAVRPTNIMGTTKRMAELILQALA
KTQNTTRFCMVRFGNVLGSSGSVVPLFNKQIQEGGPITLTHQKITRFFMTIPEAASLVIQ
AGAMGKGGDVFVLDMGKPVKIYDLAVRMIHLSGLTLKNEKNPDGDIEILITGLRPGEKLY
EELLIGENVQGTLHPRIMTATETMLDWHVLNNILQQLDILCSEYKIDEIRDLLISSSTAF
SPTTENCDMVYQNLSQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgttacttagtcataataaagattctagaactaaagttttgatctatggggctggttat
tcaggccgacaactactaacagccttaaatcaaagttctcattattcagtcattggcttt
attgatgataataaagctctgcataaaaccatattacatggcattactgtttatagccct
aaatcattaggcaaattaatagacaataaaaacattaaaaaaatcctattagcaatgcct
agtgcaacgcaaagtcagcgtaaagcgattattaatcgaattagtaaatataaatgtgaa
gtacttacaataccaggaatggaagatattgtcagcggtaaagcacatttaactagttta
aatcaagtttcaatttctgatctcttagggcgtgatccagtaactcccattgagtcctta
ttggcgcaggatataaaaaataaaattgttatggtgaccggtgctggtggttctatcggt
tctgagttatgccgtcagattattaagcaatcacctaaaaagttaattttatttgagtta
aatgaattttcgttatatcaaatacaccaagaattattaaaaaatgctgattttcaacac
gttgaactaattccattattgggttcggtacaaagaaagcatagactagatattataatg
cgttcattcaaagtagaaacggtttaccacgcagccgcatataaacacgttcctttagtt
gaatacaatgttgttgaagggattcgtaataacatttttggaaccttatattgtgcccaa
gcagctattgaagcaggagtttctacttttgtcttgatttctactgacaaagcggttcgt
ccaaccaatataatgggtacaacaaagcgtatggctgaattaattctacaagcattggcc
aaaacgcaaaatacaacgcgtttttgtatggttcgttttggaaatgttttaggttcttcg
ggttctgtggttccattatttaataaacagattcaagaaggtggcccaataacattaaca
catcaaaaaatcacgcgcttttttatgacaatccctgaggccgcctcactagttatccaa
gctggtgcaatgggaaaaggtggagatgtttttgttttagatatgggtaaaccagtaaaa
atttatgatttagccgtaagaatgattcatttaagcggtctaacattaaaaaatgaaaaa
aatcctgatggggatattgagatcttaattacgggtcttagaccgggtgaaaaattatat
gaagaattacttattggggaaaatgtgcaaggaacgctacaccctcgtattatgaccgct
accgaaacaatgcttgattggcatgtgctaaataatattttgcaacaactagatatactg
tgttcagaatacaagattgatgagattagggatttattgatttcttcatctacagctttt
agcccaacaacagaaaattgtgatatggtatatcaaaatttatctcaataa
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