Avibacterium volantium: NCTC3438_01914
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Entry
NCTC3438_01914 CDS
T06626
Symbol
kdgR
Name
(GenBank) Pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avt03000
]
NCTC3438_01914 (kdgR)
Transcription factors [BR:
avt03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NCTC3438_01914 (kdgR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_5
TrmB
HTH_11
MarR
MarR_2
Mga
FUR
Dimerisation
HTH_7
HTH_DeoR
FeoC
HTH_22
Fe_dep_repress
HTH_Crp_2
HTH_29
HTH_26
Rrf2
HTH_6
HTH_24
GAF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
VEB25050
UniProt:
A0A3S4IDH1
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Position
1:complement(1986078..1986866)
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AA seq
262 aa
AA seq
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MEKDTQPDVVSSVLKVFGIVDALSEQKEIGVTDLAQRLMMSKSTIYRFLQTMKGLGIVAQ
EGETDKYRLTLKLFELSARALEYVDLIELANKEMEEISKQTGETLHLGTLDGNEIVYLHK
IDSTYNLRMYSRVGRRNPSYSTAIGKVLLSAHTDDEVETLLKEVEFIPHTANTLKNIEEL
KQELALVREQHYAEDKEEQEVGLHCVAAPIYDRFGHCIAAISISLPLVRFEKENLTHLVD
LLHQAGRNVSKQLGYQHYPVAE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagatactcaacccgatgtcgtatcatcagtattgaaagtattcggtattgtt
gatgcgttaagtgaacaaaaggaaattggtgtaacggatcttgctcagcgtttaatgatg
tcgaaaagcacgatctatcgttttttgcaaacgatgaaaggcctagggattgtggctcaa
gaaggtgaaacggataaatatcgcttaaccttaaaattatttgaactcagcgcaagggca
ttggaatatgtagatttgattgagttggcaaataaagaaatggaagaaatctcaaaacaa
acaggggaaaccctgcatttaggcacccttgatggcaatgagattgtgtatttgcataaa
attgattccacttacaatttaagaatgtattctcgcgtggggcggcgaaatccttcgtac
agcacggcgattgggaaagtgttgctttccgcacatactgatgacgaagtggaaaccttg
ttgaaagaggtggaatttatcccgcacacggcgaacacgcttaaaaatatcgaagaactc
aagcaagaattagcattggtgcgtgaacagcattatgctgaagataaagaagaacaagag
gtcggactacattgtgtcgccgcaccgatttacgaccgctttggacattgcattgccgcc
atttcgatttcattgccgttagtgcgttttgaaaaagaaaacctcactcaccttgtggac
ttgcttcaccaagcaggacgtaatgtgtcgaaacagctgggctatcagcattatcctgtg
gcggaataa
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