Avibacterium volantium: NCTC3438_02004
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Entry
NCTC3438_02004 CDS
T06626
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
avt
Avibacterium volantium
Pathway
avt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC3438_02004 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avt03400
]
NCTC3438_02004 (ung)
Enzymes [BR:
avt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC3438_02004 (ung)
DNA repair and recombination proteins [BR:
avt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC3438_02004 (ung)
Prokaryotic type
NCTC3438_02004 (ung)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VEB25137
UniProt:
A0A447ST62
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All DBs
Position
1:complement(2067153..2067821)
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AA seq
222 aa
AA seq
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MKTWKDVIGGEKSQPYFQQILQQVQREKAAGKIVYPPSNEIFNAFKLTEFDQVKVVILGQ
DPYHGPNQAHGLSFSVKPGIAPPPSLVNIYKELANDVGFQIPQHGYLVSWAEQGVLLLNT
VLTVEQGKAHSHSNFGWETFTDRVIAALNEQRENLVFLLWGSHAQKKGQFIDRQKHCVLT
APHPSPLSAHRGFLGCKHFSQTNAYLQQHQLAPIEWQLPLTL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtggaaagatgtgattggtggcgagaaaagccagccttattttcagcaaatc
ttacaacaagtccagcgtgaaaaagcggcgggcaaaattgtctatccgccgagcaatgag
attttcaatgccttcaaattaaccgagtttgatcaagtgaaagtggtgattttggggcaa
gatccttaccacgggccaaaccaagcgcacggtttatctttttcggtgaaacccggtatt
gcgccaccaccctcgttagtcaatatttataaagaattagccaatgatgtgggctttcaa
attcctcagcacggttatttagtgagctgggcagaacaaggtgtactgctgttaaatacg
gttctaaccgtggaacaaggcaaagcccattcccattcaaattttggttgggaaactttt
accgatcgggtgattgccgccttaaatgaacaacgcgaaaatcttgtttttctcttatgg
ggcagccacgcgcagaaaaaagggcaatttattgatagacaaaaacattgcgtgctaact
gcgccgcacccttcgcccttatctgcacatcgcggatttctcggttgcaagcatttttcg
caaacgaacgcctatttacaacagcatcaattagcgccgatagaatggcaactgccctta
acgctttaa
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