Boudabousia tangfeifanii: BK816_02000
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Entry
BK816_02000 CDS
T04541
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
avu
Boudabousia tangfeifanii
Pathway
avu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BK816_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avu03021
]
BK816_02000
03400 DNA repair and recombination proteins [BR:
avu03400
]
BK816_02000
Enzymes [BR:
avu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BK816_02000
Transcription machinery [BR:
avu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BK816_02000
DNA repair and recombination proteins [BR:
avu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BK816_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AOZ72216
UniProt:
A0A1D9MIV7
LinkDB
All DBs
Position
533216..537118
Genome browser
AA seq
1300 aa
AA seq
DB search
MLDANVFDKLHIGLATSTDIQAWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMGHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMITDVDAEGRAEDLPNLQKELELEFKNIDSQRDQAIEERAIALEKD
LVEVDPEAKSAAKDRDKLQKAAERDMADIRHQYDEEKEFINQVWEKFKSLKVGDLEGSDA
VFREMQMRYGIYFEGSKGAAAVKRRLENFDLEAEAKELRQIIESGTGQRRTRALKRLKVV
NAFLSTGTSPVGMVLDYVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLE
LNAPEIIVDNEKRMLQESVDALFDNGRRGRPVTGPSNRPLKSISDMLKGKQGRFRQNLLG
KRVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLEERKLAQNVKAAKRMVERQ
KNAVWDVLDEVIREHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCTAFNADFDGD
QMAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTIPAQDMVIGLFHLTSNPDPEVEVA
KDNEGNEIVPRYSSVAEAIMAYDAGLLHLNAKCLIHFDSLVPPRDWEAPEGWTEGDPVDL
ETSLGRTLFNDALPVEYPFVNHEVTKKQLGKIVNDLAERYPKALVAASLDALKQAGYDWA
PKSGITIAFTDIVGPADKPEILAKYEERAAKTQDDFELGAIQEEERYVDLVNIWTEATDE
VAAAMRANFPERNTVYRMVYSGARGNWDQIRQIAGMRGLVSDPKQKLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTRRGLNMPIGEE
KDGTVVELDIVETTAYARTLAKDVTDAEGNLVAHAGQDVGDVLIEKLIAAGVTNIQVRSV
LTCESAVGCCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAAD
ITQGLPRVQELFEARTPKGEAEIAEASGRIKIDDDDPAARRVIIVRDDGEEDLVVEVSRR
QELLVGEGVHVEAGAQLTEGRIDPKKLLRIKGQNETQRQLVAEVQEVYRSQGVDIHSKHI
EVIVRQMLRRVTVIDSGDTNLLPGELVDQAAYKRENKRVMAEGRKPASARPELMGITKAS
LATDSWLSAASFQETTKVLTEAAMTGKSDPLVGLKENVILGKLIPAGTGLQRYQEVIVEP
TQEAMDEIGLTRADIEPAPVMDEDSFLAGLDFGAAFSDGF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgccaacgtcttcgacaaactacacattggtctggctacatcaaccgacatc
caggcctggtcccacggggaagttaagaaacccgagaccatcaactaccgtactctcaag
cccgagaaggacggcctattctgcgaacgtattttcggtccaacccgcgactgggaatgt
gcttgtggtaagtacaagcgtgtccgttacaagggcatcgtctgtgaacgctgtggagtg
gaagtaacccgctccaaggttcgccgtgaacgcatgggccacattaagttggctgcccct
gtcacccacatttggtacttcaagggcgtcccttcccgtttgggctacctactcaacttg
gctcctaaggacctcgaaaaggtcatttacttcgccgcctacatgatcactgatgtggac
gccgaaggccgagctgaagatctgcctaacttgcagaaggaactcgaactcgaatttaag
aacattgattcgcagcgcgatcaggccatcgaagagcgtgctatcgccctcgaaaaggat
ttggtcgaggtcgatccagaagctaagtccgcagccaaggatcgcgacaagctccagaag
gccgctgaacgcgacatggctgatattcgccaccagtacgatgaagaaaaagaattcatc
aaccaggtgtgggaaaaattcaagagcctcaaggtcggtgacctcgaaggttctgacgcg
gtcttccgcgaaatgcagatgcgttacggcatctactttgaaggctcgaagggtgccgcc
gctgttaagcgtcgcctagaaaacttcgacctcgaagcagaggctaaggaactacgccag
attatcgaatccggcactggccagcgtcgcactcgcgcactcaagcgcctcaaggtggtt
aacgctttcctctccaccggtacttcgccagtgggtatggtgcttgactacgttccagtg
atcccaccggacttgcgcccaatggtgcagctcgatggtggccgtttcgcgacctcggac
ctcaacgacctttaccgtcgcgttatcaaccgtaacaaccgtttgaagcgacttttggaa
cttaacgctccagaaatcatcgtggacaacgaaaagcgcatgctccaggaatcggttgac
gccttgttcgacaatggtcgtcgtggccgtccggttaccggtccttccaaccgcccactc
aagtccatctcggacatgcttaagggtaagcagggtcgtttccgtcagaacctcctcggt
aagcgcgtggactactccggtcgttccgttatcgtggttggtcctcagctcaagttgcac
cagtgtggtctgcctaagcagatggcactcgaactcttcaagcctttcgtcatgaagcgt
ctggaagagcgcaagctcgcccagaacgtcaaggcagcaaagcgcatggttgaacgccag
aagaatgctgtgtgggacgtcctcgatgaggtcattcgtgagcacccagtattgctaaac
cgtgcacctaccttgcaccgtcttggtattcaggccttcgaaccacagctagttgaaggt
aaggctattcagctgcacccactagtttgtactgcattcaacgcggacttcgacggtgac
caaatggcggttcacttgccacttggtgccgaagctcaggctgaagcacgtatcttgatg
ctgtcctcgaacaacattttgaagccttccgatggtcgcccagtgaccatcccggcacag
gatatggttattggtctgttccacttgacctccaacccagatcctgaggttgaggttgct
aaggacaatgaaggcaacgaaatcgtgccacgctactcctcggtagctgaagccatcatg
gcttacgatgcgggcctacttcaccttaacgccaagtgcttgatccacttcgattccctc
gtgccaccgcgcgactgggaagcccccgaaggctggaccgagggcgatccggtggacttg
gagacctccttgggtcgtaccttgttcaacgacgctttgccggtcgaataccccttcgtt
aaccacgaagtgaccaagaagcagctaggtaagatcgttaacgacttggccgagcgttac
ccgaaggctttggttgctgcctccctcgatgctttgaagcaagctggttacgactgggca
cctaagtccggtattaccatcgccttcaccgacattgtgggcccagctgacaagcctgag
atcctcgctaagtacgaagagcgcgctgccaagactcaggacgacttcgaacttggtgct
atccaggaagaagaacgttacgtcgacttggtcaacatttggactgaagctaccgacgaa
gttgctgccgcgatgcgcgccaacttccctgagcgcaacaccgtttaccgtatggtttac
tcgggcgctcgtggtaactgggatcagatccgtcagatcgccggtatgcgtggtttggtg
tctgacccgaagcagaagctgattgaacgtccgattaagtcgaactaccgtgaaggcttg
tccgttctcgaatacttcatcgcgacccacggtgcccgtaagggtctagccgataccgcg
ttgcgtaccgctgactcgggttacttgacccgtcgtctagtagacgtttcgcaggacgtc
attattcgcgaagaagactgtggcactcgccgtggtctgaacatgccaatcggtgaagaa
aaggacggcactgtagtcgaactcgacatcgtcgagaccactgcttacgcccgtaccttg
gctaaggatgtcactgacgctgaaggcaacctggtggctcacgctggccaggatgttggc
gacgttttgattgaaaagctaatcgccgctggcgtcaccaacattcaggttcgctccgtc
cttacctgtgaatctgctgtcggttgctgtgccgcatgttacggccgctccttggctacc
ggtaagcgcgttgatatcggcgaagccgtcggtattattgctgctcagtcgattggtgaa
cctggtacccagctaaccatgcgtaccttccacactggtggtgtcgcttcggctgcggat
attacccagggtctacctcgtgttcaggaactcttcgaagcccgtactcctaagggtgaa
gctgagattgctgaggcttccggccgcatcaagattgacgatgacgatccggcagcacgc
cgcgtaatcatcgttcgcgatgacggcgaagaagacttggttgtcgaggtttcgcgtcgt
caggaactattggtcggcgaaggcgttcacgttgaggctggtgctcagctaactgagggt
cgcattgacccgaagaagttgctccgcatcaagggccagaacgaaacccagcgccagttg
gtggctgaagttcaggaagtttaccgctcccagggtgtagacattcactccaagcacatt
gaagtgattgttcgccagatgcttcgccgcgtaaccgtgatcgattcgggtgacaccaac
ttgctaccaggcgaattggttgatcaggccgcttacaagcgcgaaaataagcgcgtgatg
gcggaaggccgtaagcctgcttcggcccgtccggaactcatgggtatcaccaaggcctcc
ttggctaccgattcttggttgtcggctgcttccttccaggaaaccactaaggtcctcacc
gaggccgccatgaccggcaagtccgacccattggtcggcttgaaggaaaacgtcatcctc
ggtaagttgatcccggctggtaccggtttgcagcgttaccaggaagtcatcgttgaacct
acccaggaagcgatggacgagatcggtttgacccgcgctgacatcgaaccagccccagtg
atggatgaagattccttcctcgctggcttggacttcggtgctgctttctcggacggtttc
taa
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integrated database retrieval system
