Boudabousia tangfeifanii: BK816_04245
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Entry
BK816_04245 CDS
T04541
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
avu
Boudabousia tangfeifanii
Pathway
avu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK816_04245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avu03019
]
BK816_04245
03009 Ribosome biogenesis [BR:
avu03009
]
BK816_04245
Enzymes [BR:
avu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BK816_04245
Messenger RNA biogenesis [BR:
avu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BK816_04245
Ribosome biogenesis [BR:
avu03009
]
Prokaryotic type
rRNA helicases
BK816_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOZ72602
UniProt:
A0A1D9MJZ1
LinkDB
All DBs
Position
complement(1050768..1052609)
Genome browser
AA seq
613 aa
AA seq
DB search
MSELSFADLSLPQDLLQAVENLGFTTPTPIQEQAIPHLLAGRDIVGVAQTGTGKTAAFGL
PLLAQVDAGGPVQALVLAPTRELALQSADSIDEFARESRGVDILAVYGGSPYGPQLGALK
RGVQVVVGTPGRVIDLISRGALDLTNVRMFVLDEADEMLRMGFAEDVETIAETVPDSAIT
ALFSATMPPAIAKVAKTHLKDPVNVTVSRQASTTTTVRQTYAVVPFKHKMGALSRVLATR
TADAAIVFVRTRADAEEVSIDLTSRGFRTAGISGDVAQRERERIVERLRSGSLDVLVATD
VAARGLDVDRIGLVVNFDVPREDEAYVHRIGRTGRAGRTGTALTFFTPREASRKKRIEKL
TGAKLEEVAIPTPREVSEFRAKNTLNHLDERIEKGRLELYFDLLHELTKDEEVDIYDVAA
ALLAEAVGDHGPDAQPDVRGNGRVRREELVDEEGNFVAATFEPGRDEPRKAARAGRRGDR
ETRPVRATGAMRRYRVEVGHRDGVRPGAIVGAITNEGGIDGRDLGKIDIFPSFSLVEISG
GLEPDASSRIARATVSGRQLRISEDSGPRGSRDDDGDRFDRRQGGDRRFDRRGGGSRPFK
SGAKKFSKKRRSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaactttcctttgcagatctttccctgccccaagaccttctacaggctgtagaa
aacctaggctttaccactcctactccgattcaggaacaggcgatccctcatttgctagct
ggccgtgacattgtcggcgtagcacaaactggtaccggtaagactgccgcttttggtttg
ccacttttggctcaggttgatgcgggcggtccggtccaagcactggtcttagcacccact
cgtgaacttgctttacagagtgccgattcgatcgacgaattcgcccgtgaaagccgtggc
gtcgatattttggcagtttatggtggctccccctacggcccacagctcggagctcttaaa
cgcggagtacaggtagtagttggtactcccggtcgtgtcatcgacttgatttctcgtggc
gccctcgacctgactaatgtccgcatgtttgtgctggacgaggccgatgaaatgcttcgt
atgggtttcgctgaagatgtggaaaccattgcagaaaccgtgcctgattcagctattact
gcgctcttctcggccactatgccaccggctattgccaaggtcgccaagactcacttgaag
gatccagtcaacgtaactgtttctcgtcaagcctcaactaccactactgttcgtcagact
tacgcggtagttccgttcaagcacaaaatgggcgccctatcgcgtgtcttggcaacccgt
actgcggatgccgccatcgtcttcgttcgtacccgtgccgatgcggaagaagtcagcatc
gatctaacttcccgcggttttagaactgccggtatttcgggtgacgtggcccagcgtgaa
cgtgaacgcattgtagagcgcttgcgctccggtagccttgatgtgctggtagctaccgac
gtggctgcccgtggcctagacgtagatcgtatcggtcttgttgttaacttcgatgtgcct
cgcgaagacgaagcttatgtgcaccgcattggtcgtaccggccgcgcgggacgtactggc
accgcgctaactttcttcacaccacgtgaagcttcccgtaagaagcgaattgagaagctt
actggcgccaagctggaagaagtggcgattcctactcctcgcgaagtcagcgaattccgc
gccaagaacactcttaatcaccttgatgagcggattgaaaagggtcgtttggaactctac
tttgacttgttgcatgaactcaccaaggatgaagaagtagatatttatgatgttgctgct
gctttgctagcggaagccgtgggtgaccatggcccagatgctcagccagatgttcgtggc
aatggtcgcgttcgccgagaagaactagttgacgaagaaggcaacttcgtagccgctact
tttgaaccaggacgcgatgagccccgtaaggctgctcgtgctggtcgtcgtggcgatcga
gagactcgtccagttcgcgcaactggtgcgatgcgtcgttaccgtgtcgaggttggacac
cgtgacggagtacgtccaggtgccatcgttggggcgattaccaacgaaggtggcatcgat
ggtcgcgacttaggcaagattgatatcttcccgtcgttctccctagtagaaatctctggc
ggacttgaacctgacgcttcttcgcgcattgcgcgggcgactgtttctggtcgtcagctt
cgcatcagcgaagactccggtcctcgtggtagccgtgatgatgacggagatcgtttcgat
cgccgacaaggtggcgaccgtcgctttgatcgtcgcggtggcggtagccgaccattcaaa
tcaggcgctaaaaagtttagcaagaagcgtcgttctttctga
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