Agrobacterium vitis VAT03-9: RvVAT039_00570
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Entry
RvVAT039_00570 CDS
T08809
Symbol
psuG
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00240
Pyrimidine metabolism
avv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RvVAT039_00570 (psuG)
Enzymes [BR:
avv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
RvVAT039_00570 (psuG)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
BCH62841
LinkDB
All DBs
Position
1:57051..57974
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AA seq
307 aa
AA seq
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MTRSISPLLPIVYAREVAAAKTRNAPIVALESTIITHGMPYPKNVEMAQSVEAIIRDGGA
VPATIAVIEGVLHIGLEEDQLQKLAQMTDVLKVSRADLAYAIAERRTGATTVAATMIAAA
RANISVFATGGIGGVHRGAEESFDISADLEELARTPVIVVCAGAKAILDIPKTLEVLETR
GVPVVTYDSDEFPAFWSRESGLKSPLKLESPAAIANFQKVRDQLGIDGGMLIANPVPETD
EIAREEMEIYIGRALAAAEREEITGKAVTPFLLDAIYHLTDGRSLTTNIALVENNARLAA
EIAVAML
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttcgatttctccgctcctgcccatcgtatacgcccgcgaagtggctgcggcc
aagacgcgcaatgcgcctattgtcgcgctggaatccaccattatcacccatggcatgccc
tatccgaaaaatgtcgagatggcgcaaagcgtggaggcaatcattcgcgacggtggtgcg
gtcccggcgaccatcgctgtgattgaaggcgttttgcatatcgggctggaagaagatcag
ttgcaaaaactggcgcaaatgactgatgtcctgaaggtctctcgtgccgatctcgcctac
gccattgccgaacgccgcaccggcgctaccacggtagccgcgacgatgatcgccgccgcc
cgggccaatatctcggtttttgccaccggcggcatcggcggcgtgcatcgtggcgcagaa
gaaagctttgacatttcagcggacctggaagaactggcccgtactccggtcatcgtcgtc
tgcgccggagcaaaagccattcttgatattcccaagaccctcgaagtcctggaaacccgt
ggcgtacctgtcgtgacttacgacagcgatgaatttccggctttctggtcgcgggaatcg
ggcttgaaaagcccacttaaactggaaagcccggcagcaattgccaatttccagaaagta
cgcgaccaattgggcattgatggcggcatgttgatcgccaatcccgtgccggaaacagac
gaaattgcgcgcgaggaaatggaaatctatattggccgggcgctggccgctgccgaacgc
gaggaaatcaccggaaaagccgtgacgcctttcctgctcgacgcaatctatcacctcacc
gacggccgcagcctgaccaccaatatcgcgttggtggaaaacaacgcgcgtcttgcagcg
gaaattgccgtcgcgatgctgtaa
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