Agrobacterium vitis VAT03-9: RvVAT039_00610
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Entry
RvVAT039_00610 CDS
T08809
Symbol
ppiD_1
Name
(GenBank) peptidyl-prolyl cis-trans isomerase
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
avv03110
]
RvVAT039_00610 (ppiD_1)
Enzymes [BR:
avv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
RvVAT039_00610 (ppiD_1)
Chaperones and folding catalysts [BR:
avv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
RvVAT039_00610 (ppiD_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
Rotamase_2
SurA_N_2
Motif
Other DBs
NCBI-ProteinID:
BCH62845
LinkDB
All DBs
Position
1:63920..65809
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AA seq
629 aa
AA seq
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MLVILRKAAGTWVAKGLLLLLVASFAIWGISSSIMSDTSDKVIKVGSQSVNSNEFRLAYQ
RQISDLSRRFGTQLTSEQARSLGIESQVYQQLVAGAALDQLASDMNLGLSQDRLAQLIGD
DPAFKNTNGQFDRQLFTSRLRNSGIREQDYITERSKVAVRSQIVDATAEGFVPPKVLIDA
LKLYRQESRSIDYLLLTTANIDPIKAPDETVLKTWFNTMKSRYRAPEYRSFSYVKLEPAD
IADPKAVTDEEVKQEYDANLKKFEVAGTRTLEQLTFPTKELAETAAQSLKNGKTFDQLVA
DQGKTATDVLLGDFTRADIPDQKLADAAFAVAKDSDTTPVVEGAFGPVILRVSNIKPSHT
KTLDEVKDQIRADLAANAAAQQINDVHDRFEDMRASGSSLEEAATKAGLKAIKVEGIDAQ
GQDKTGKAAENLPEKANLLKSVFETEAGAEPLPLNIGRNGYLWFDVTSIDASRERTLDEV
KDKAVADWTTEQQKQALGAKVEQLKAKADTGVALADLATELAIGVETKAGLRRDTEDPVL
GPAAVQAAFRGPSGTIGSAVGADPMTQILLKVTDVNTQPTGDVVDQQESQITALAKSAGD
DILDQMVNQLQTKYGVTINQALAQQAITR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgatcctgagaaaagctgccggcacctgggtggcaaaagggcttcttcttttg
cttgtcgcgtccttcgcgatttggggcatttccagctcgatcatgagcgacacgtcggac
aaggtcatcaaggtcggcagccagagcgtcaattccaacgaattccgcctcgcctatcag
cgacagatctccgatctcagccgccgtttcggcacgcaattgacaagcgagcaggcccgt
tcgctcggcatcgaatcgcaggtctaccagcagcttgtcgcgggtgcggccctcgatcag
ctggcctcggacatgaatctcggcctttcccaggaccgcctggcgcagttgatcggcgac
gatccggccttcaagaacaccaatggccagttcgacaggcaattgttcacctcacggctg
cgcaattccggcattcgcgagcaggattatatcaccgagcgctccaaggttgcggttcgc
agccagatcgtcgatgcgacagcggaaggattcgtgcctccgaaagtgctgatcgatgcg
ttgaaactctatcgccaggaaagccgcagcattgactacctgctgctgaccactgccaat
atcgacccgatcaaggcaccggacgaaacggttctgaaaacctggttcaacacgatgaaa
tcgcgctaccgcgcgccggaatatcgcagcttttcctatgtaaaactggagcctgccgat
atcgccgatccgaaagccgtgaccgacgaggaggtgaagcaggaatacgacgccaacctc
aagaaattcgaagtggccggcacccggacgctggagcaattgacgttcccgaccaaggaa
ctggccgaaaccgctgctcagtcgctgaagaatggcaagaccttcgatcagttggtggcc
gaccagggcaagacggcgacagatgtgctgctgggtgatttcacccgggcagatattccc
gatcagaaactggccgatgccgcattcgcagtcgccaaagacagcgatacaacacctgtc
gttgaaggcgccttcggcccggttattctgcgggtcagcaacatcaagccaagccacacg
aagacgctggacgaagtcaaggatcagattcgcgccgatcttgctgccaatgccgcggcc
cagcagatcaatgacgtgcatgaccggtttgaggatatgcgtgcctccggttcgagcctc
gaggaagccgccactaaggctggcctgaaagccatcaaggttgaaggtatcgatgctcag
ggacaggacaagacaggcaaggccgcagaaaatctgccggaaaaagccaatctgttgaaa
tcagtcttcgaaaccgaagcgggtgcagagcccctgccgctcaatatcggcagaaatggc
tatctgtggttcgacgtgacgtccatcgatgcgtctcgtgagagaacgctggacgaggtc
aaggacaaagcagtcgccgactggaccaccgagcagcagaaacaagcgctgggcgccaag
gttgagcagttgaaggccaaggccgatacgggagtggcactggccgatctcgcgactgaa
ctggccatcggcgtcgagaccaaagccggtcttcgccgcgataccgaagatccggtgctt
ggccctgccgccgtccaggccgcattccgtggaccgtccggcacgattggctcggcggtt
ggcgccgatccgatgacccagatcctgttgaaggtcacggatgtcaacacccagccgacc
ggtgatgtcgtcgaccagcaggaaagccagattaccgcactggcgaaatccgccggtgac
gatattctcgaccagatggtcaaccagctccagaccaaatatggcgtcaccatcaatcag
gcgctggcccagcaggccatcacacgctga
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