Agrobacterium vitis VAT03-9: RvVAT039_01050
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Entry
RvVAT039_01050 CDS
T08809
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00860
Porphyrin metabolism
avv01100
Metabolic pathways
avv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAT039_01050 (cobD)
Enzymes [BR:
avv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
RvVAT039_01050 (cobD)
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BCH62889
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All DBs
Position
1:complement(112646..113617)
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AA seq
323 aa
AA seq
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MMEAHLLILALALVLDRVVGDPPWLWARLPHPVVVFGTCISAFDRLLNRPALADPLRKAG
GVLTIVLLLMASLGVGYGLHRLFAALGFIGFLLEIAVTAVFLAQKSLLDHVKAVADGLLH
EGLAGGRRAVSMIVGRDPDVLDEAGVARAALESLSENFADGVVAPAFWYGLLGLPGLFAY
KMLNTADSMIGHKSERYMQFGWASARLDDLANWPAARLAGLLIVCAAGTGEGIATAKRCF
TVMMADHGLHRSPNSGWPEAAAAGALDVALAGPRIYAGDLVYEPMMNAAGQRTIDGEDIR
RGLVLIDGAWRIGVGILLLLVLL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagcgcatctgcttatcttagctctggcgctggtgcttgaccgcgtggttggc
gatccgccctggctatgggcgcgcctgccgcatccggtcgtggtgtttggcacatgtatt
tcggccttcgaccggctgctgaaccggcctgctctggccgatccgctgcgcaaggcgggc
ggggtgttgacgattgtgcttctgctgatggcaagccttggcgttggatatgggctgcat
cgcctgttcgcggcacttggctttatcgggttcctgctggaaattgccgtcacggcagtg
tttctggcgcagaaaagtctgctggaccatgtgaaggccgtcgccgatggcttgctgcat
gaaggccttgccggtggtcgccgggcggtgtcgatgattgtcgggcgcgatcccgatgtg
ctcgatgaggccggtgtggcgcgtgccgcgctggaaagcctgtcggaaaactttgccgat
ggggtggtggcaccggccttctggtatggcctgctcggcctgccgggtctgtttgcctat
aaaatgctgaacactgccgattctatgatcggccataaatccgagcgctatatgcaattc
ggctgggcttctgcccggctggacgatttggccaattggcccgctgcccggctggcggga
ttgttgatcgtctgtgctgccggcactggtgagggtatagcgacggctaaaaggtgcttt
acggtgatgatggctgatcacggcctgcatcgctcgcccaattccggctggccggaagcg
gcggcggcgggcgcgctggatgtggcgctggcggggccgcgtatctatgccggagacttg
gtctacgagccaatgatgaatgctgcggggcaacgcaccatcgatggtgaggatatccgg
cgcggtcttgtgctgattgacggtgcctggcgtatcggagttggcattttgctactgctg
gtcctgttgtga
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