Agrobacterium vitis VAT03-9: RvVAT039_01070
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Entry
RvVAT039_01070 CDS
T08809
Symbol
cobB
Name
(GenBank) hydrogenobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00860
Porphyrin metabolism
avv01100
Metabolic pathways
avv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAT039_01070 (cobB)
Enzymes [BR:
avv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
RvVAT039_01070 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
RvVAT039_01070 (cobB)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BCH62891
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Position
1:complement(114624..115934)
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AA seq
436 aa
AA seq
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MSGLLIAAPASGSGKTTVTLGLLRALSEAGHKLAPGKAGPDYIDPAFHAAASGETCLNFD
PWAMRPELIAANAALHRQGGRTLVVEAMMGLYDGAADGTGSAADLALMLGLSVVLVVDCA
RTSHSVAALVKGFADFRPGLLIVGVIINRVASDRHEAMLRQALETIRMPVLGVIRTDTGL
ALPERHLGLVQAAEQADLEGFISHAAQVVAKGCDLDAIIRAAARSPDPVSEANIARLAPL
GHHIAVARDEAFAFCYEHMLLGWRRRGAQISFFSPLQDEAPAGDADAVYLPGGYPELHAG
RIANAHRFRAGMQAAAARPMKIYGECGGYMVLGEGLTDADGTDHAMLGLLPLKTSFATRK
RHLGYRLLRPLAGDFFAHAMTGHEFHYSTVIEEGEGDRLFATEDALGVSLGQVGLRRANV
AGSYMHLIDRAGENRS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccttctgattgccgcgcctgcctccgggtcaggcaagaccaccgtcacgctt
gggctattgcgcgccttgagcgaggccggtcacaagctggcgccgggcaaggccgggccg
gattatatcgatccggcctttcatgcggcggcaagcggtgagacctgcctgaatttcgac
ccctgggcgatgcgcccggaattgattgccgccaatgccgccctgcaccgccagggtggg
cggaccctggtggtcgaggcgatgatggggctttacgacggggcggcggatggcaccggc
tcggccgcggatcttgccctgatgctcggcctgtcggtggtgttggtggtcgattgcgcc
cgcacctcgcattccgttgccgccctggtaaagggctttgccgatttcaggcccggtctg
ctgatagtcggcgttatcatcaaccgtgtcgccagcgaccggcatgaggcgatgctgcgc
caggcgctggagacaatccgcatgccggtgctgggcgtgatccgcaccgatacggggctt
gccctgccggagcggcatttgggattggtgcaggcggcagagcaggctgatctagaaggc
ttcatcagccatgccgcgcaggtcgtggcaaaaggctgtgatctcgacgccattatcagg
gctgccgctcgcagccctgatccggtctcggaggccaatattgcccggcttgcgccgcta
gggcatcacatcgccgtggcgcgggacgaggcgtttgccttttgctatgagcatatgctg
ctgggctggcgacgccgcggcgcgcagatcagcttcttttcgcccctgcaggatgaggct
ccagcaggtgatgccgatgcggtctatctgcccggcggctatcccgaacttcatgccggg
cggatcgccaatgcccaccggttccgggcgggaatgcaggcggcggcggcaaggccgatg
aaaatttacggggaatgcggtggctatatggtgctgggtgaggggttgaccgacgcggat
ggaacggaccatgcgatgctgggacttttaccgctgaaaaccagctttgcgacgcgaaag
cgccatttgggttaccggcttttgcggccattggcgggggatttctttgcccatgccatg
accggccacgagtttcattattcgaccgtgatcgaggaaggcgagggcgaccggctgttt
gccactgaggatgccctgggcgtgtcgcttgggcaggtcggcttgcggcgtgccaatgtg
gctggctcctatatgcatctgatcgaccgtgcgggcgagaaccggtcatga
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