KEGG   Agrobacterium vitis VAT03-9: RvVAT039_01070
Entry
RvVAT039_01070    CDS       T08809                                 
Symbol
cobB
Name
(GenBank) hydrogenobyrinate a,c-diamide synthase
  KO
K02224  cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv00860  Porphyrin metabolism
avv01100  Metabolic pathways
avv01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:avv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    RvVAT039_01070 (cobB)
Enzymes [BR:avv01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.9  hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
     RvVAT039_01070 (cobB)
    6.3.5.11  cobyrinate a,c-diamide synthase
     RvVAT039_01070 (cobB)
SSDB
Motif
Pfam: GATase_3 CbiA AAA_26
Other DBs
NCBI-ProteinID: BCH62891
LinkDB
Position
1:complement(114624..115934)
AA seq 436 aa
MSGLLIAAPASGSGKTTVTLGLLRALSEAGHKLAPGKAGPDYIDPAFHAAASGETCLNFD
PWAMRPELIAANAALHRQGGRTLVVEAMMGLYDGAADGTGSAADLALMLGLSVVLVVDCA
RTSHSVAALVKGFADFRPGLLIVGVIINRVASDRHEAMLRQALETIRMPVLGVIRTDTGL
ALPERHLGLVQAAEQADLEGFISHAAQVVAKGCDLDAIIRAAARSPDPVSEANIARLAPL
GHHIAVARDEAFAFCYEHMLLGWRRRGAQISFFSPLQDEAPAGDADAVYLPGGYPELHAG
RIANAHRFRAGMQAAAARPMKIYGECGGYMVLGEGLTDADGTDHAMLGLLPLKTSFATRK
RHLGYRLLRPLAGDFFAHAMTGHEFHYSTVIEEGEGDRLFATEDALGVSLGQVGLRRANV
AGSYMHLIDRAGENRS
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagtggccttctgattgccgcgcctgcctccgggtcaggcaagaccaccgtcacgctt
gggctattgcgcgccttgagcgaggccggtcacaagctggcgccgggcaaggccgggccg
gattatatcgatccggcctttcatgcggcggcaagcggtgagacctgcctgaatttcgac
ccctgggcgatgcgcccggaattgattgccgccaatgccgccctgcaccgccagggtggg
cggaccctggtggtcgaggcgatgatggggctttacgacggggcggcggatggcaccggc
tcggccgcggatcttgccctgatgctcggcctgtcggtggtgttggtggtcgattgcgcc
cgcacctcgcattccgttgccgccctggtaaagggctttgccgatttcaggcccggtctg
ctgatagtcggcgttatcatcaaccgtgtcgccagcgaccggcatgaggcgatgctgcgc
caggcgctggagacaatccgcatgccggtgctgggcgtgatccgcaccgatacggggctt
gccctgccggagcggcatttgggattggtgcaggcggcagagcaggctgatctagaaggc
ttcatcagccatgccgcgcaggtcgtggcaaaaggctgtgatctcgacgccattatcagg
gctgccgctcgcagccctgatccggtctcggaggccaatattgcccggcttgcgccgcta
gggcatcacatcgccgtggcgcgggacgaggcgtttgccttttgctatgagcatatgctg
ctgggctggcgacgccgcggcgcgcagatcagcttcttttcgcccctgcaggatgaggct
ccagcaggtgatgccgatgcggtctatctgcccggcggctatcccgaacttcatgccggg
cggatcgccaatgcccaccggttccgggcgggaatgcaggcggcggcggcaaggccgatg
aaaatttacggggaatgcggtggctatatggtgctgggtgaggggttgaccgacgcggat
ggaacggaccatgcgatgctgggacttttaccgctgaaaaccagctttgcgacgcgaaag
cgccatttgggttaccggcttttgcggccattggcgggggatttctttgcccatgccatg
accggccacgagtttcattattcgaccgtgatcgaggaaggcgagggcgaccggctgttt
gccactgaggatgccctgggcgtgtcgcttgggcaggtcggcttgcggcgtgccaatgtg
gctggctcctatatgcatctgatcgaccgtgcgggcgagaaccggtcatga

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