Agrobacterium vitis VAT03-9: RvVAT039_01770
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Entry
RvVAT039_01770 CDS
T08809
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_01770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_01770
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_01770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
AAA
Rad17
AAA_22
AAA_25
nSTAND3
AAA_5
NACHT
T2SSE
AAA_19
NB-ARC
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BCH62961
LinkDB
All DBs
Position
1:188732..189775
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AA seq
347 aa
AA seq
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MAFLSLNNLSKTFAGLPAVRDISLSVERGEFISLLGPSGCGKTTTLQMIAGLVDPSAGSI
ILDGSDITKTPPNRRGLGIVFQTYALFPHMTALENVAFGLAMRGVAKVERIERARAALKQ
VKLEQFAARFPKDMSGGQRQRVALARALVIEPPLLLLDEPLSNLDAKLREDMRIELRLLQ
QDLGVTTILVTHDQEEALSMSDRVVVMQQGDIAQIATPLELYERPTNGFVSDFVGKTNLL
SAIVSGPQTVDVGGETVLVRNHDLTTGTPVTLSIRPEKFRMTANAPGHQVRVEAAIFLGA
SWLYRVSGSLGDLFVTQPNTGEAGYAQGDIAWLDWPATAMSVFAETA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcctttctctcgctcaataatctttccaaaacgtttgccggtctccccgctgtgcgt
gacataagcctgtctgtcgagcgcggtgagttcatatccctgcttggcccctccggctgc
ggcaagacaacaacgctgcaaatgattgcgggccttgtggatccatctgctggaagcatc
attcttgacggcagcgacatcacaaagacaccaccaaaccgccgagggctcggcatcgtg
tttcaaacctatgccctgtttccccatatgactgcgttggaaaatgtcgcattcggcctg
gcgatgcgtggtgttgcgaaggtcgagcggattgaacgcgctcgtgcagccctcaagcag
gtcaagttggagcagtttgcggcgcggtttccaaaggacatgtcaggcggtcagcgacag
cgcgttgccttggcgcgggcactggtgattgagcctcccctgctcttgttggatgaacct
ctttccaacctcgatgcgaaactgcgcgaagacatgcggatcgaactacgattgctgcaa
caggatctcggcgtcacaaccattttggtaacccatgatcaggaggaggccctgtcgatg
agcgatagggttgtggtcatgcagcaaggtgatatcgcgcagattgccacaccgttggag
ctttatgagcggccaaccaatggctttgtgtcagacttcgtcggaaagaccaatctgttg
agtgctattgtttctggtccgcagaccgtcgatgtgggtggagaaacagtgctggtaaga
aaccacgacctgaccactggcacacccgtgacgctctccattcgccctgagaaattccgg
atgactgcgaatgctccgggccatcaggtccgcgttgaggccgcaatttttctgggtgca
agctggctctaccgtgtttccggcagcttgggcgatctgtttgtgacccagcccaacact
ggcgaagcgggttatgcccaaggtgacatcgcgtggcttgattggccagcaactgccatg
agcgtatttgcggagacggcgtga
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