Agrobacterium vitis VAT03-9: RvVAT039_03300
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Entry
RvVAT039_03300 CDS
T08809
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03030
DNA replication
avv03430
Mismatch repair
avv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RvVAT039_03300
03430 Mismatch repair
RvVAT039_03300
03440 Homologous recombination
RvVAT039_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avv03032
]
RvVAT039_03300
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_03300
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RvVAT039_03300
DNA replication proteins [BR:
avv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RvVAT039_03300
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RvVAT039_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BCH63114
LinkDB
All DBs
Position
1:complement(327498..328121)
Genome browser
AA seq
207 aa
AA seq
DB search
MSTPLQPKIIAIDFETANEERGSACSVGLAFVENGQVVRVEERLIRPKTMRFSSFNIAIH
GIRPDHVEDAGEFPEVMDEFADDFSGAMVVAHNAAFDLSVWRACCDLYRQPYPSLSYVCS
VKLAQKVWPQLPSHRLNVLAAHLQLSFRHHNAAEDASVCAQAVIAMMERRGAQDLGELAG
MMGISIGRLFPGGYQSCSVRKPARVSA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccattgcagcccaaaatcatcgcaatcgatttcgagaccgccaatgaagag
cggggcagcgcctgttcggtcgggctggcctttgtcgagaacgggcaggtggtgcgggtg
gaggagcggctgatccggccaaaaaccatgcggttttcctccttcaacatcgccatccac
gggatccggcctgatcatgtcgaggatgcgggcgagtttcccgaggtgatggacgaattc
gccgatgatttctcgggcgcgatggtggtggcgcataatgccgccttcgatctgtcggtg
tggcgggcatgttgcgatctctatcgccagccctatccaagcctgtcttacgtgtgcagt
gtcaagctggcgcagaaggtctggccgcaattgccctcccatcggctgaatgtgctggca
gcacatctgcaactgtccttccggcatcacaatgcagccgaagatgcgtcggtttgcgcg
caagcggtgatcgcgatgatggagcgccggggcgcgcaggacctgggcgagcttgctggc
atgatggggatttccatcggacggctgtttccaggcgggtatcagtcctgctcggtgcgc
aagccagcgcgggtttcggcttga
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