Agrobacterium vitis VAT03-9: RvVAT039_06040
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Entry
RvVAT039_06040 CDS
T08809
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RvVAT039_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avv03019
]
RvVAT039_06040
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RvVAT039_06040
Messenger RNA biogenesis [BR:
avv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RvVAT039_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
CHAD
Motif
Other DBs
NCBI-ProteinID:
BCH63388
LinkDB
All DBs
Position
1:complement(604127..605389)
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AA seq
420 aa
AA seq
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MTTVADRPWFQDAALAKVFALLNADGGEVRVVGGAVRNSLLGEPVGDIDLATTLVPSEVT
ARAEAAGIKAVPTGIEHGTVTLVIGGKPFEVTTLRRDVETDGRHAEVAFGTDWQVDAERR
DFTINALYATASGEVIDPVGGLADLESGTLRFIGDARLRIAEDYLRVLRFFRFFAWYGRG
RPDADGLRACAAARDELHRLSAERVWSETKKLLSAKDPGRALLWMRQSGVLTAILPETEK
WGIDAIPGLIAAETALNWQREPLLRLVAMVPDNPERMKGLAERLKLSRAEAEFLQRFATA
PKIKDDMVDLALDRLLYRHDKPGIIAQLKLSLASARAKAEEDTASMAASARWFRLLQRAQ
AFEKPVFPITGSDAIAAGLAPGPEIGRVLSTLEDNWVQANFTFSREKLLSRLKEAVTPSG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggttgcggatcggccctggtttcaggatgcggcgctagccaaggtctttgcc
ctgttaaacgctgatggcggcgaggtgcgggtggtgggcggcgcggtgcgcaacagtctg
ctgggtgaaccggtaggcgatatcgatcttgccaccacgcttgtcccctccgaagtgacg
gcccgggccgaggcggcaggtattaaggcggtgccaacaggcattgagcatggcacagtg
acgctggtgatcggcggcaagccgtttgaagtgacgacgctgcggcgcgacgtggaaacc
gatggccgccacgccgaggtggcgttcggcaccgattggcaggtggatgccgagcggcgg
gattttaccatcaacgcgctctatgccacggcgtctggcgaggtcatcgatccggtcggc
gggctggcggatctagaatctggcacgctgcggttcattggcgatgcccgcctgcggatt
gccgaggattacctgcgggtgctgcgcttcttccggttttttgcctggtatggacgcgga
cgcccggatgccgacggcctgcgggcctgtgcggcggcgcgtgacgaattgcaccggctg
tctgccgagcgggtctggtcggagacgaaaaagctactgtccgccaaagatcctggtcgg
gcgctgctgtggatgcgccaatccggcgtgttgacggcgatcctgccggaaacggaaaaa
tgggggatcgatgccattccgggcctgattgctgcggaaacggccctgaattggcagagg
gagcccctgttgcggctggtggcaatggtgcctgataaccctgagcggatgaagggactg
gccgaacggctgaaactgtcgcgagccgaggcggagtttttgcagcgctttgccaccgcg
ccgaagatcaaggacgacatggtcgatcttgctctcgaccggttgctttatcggcacgac
aagcctggaattatcgcgcaattaaagctttcgctggcttcagcccgtgccaaggcagaa
gaggatacggccagcatggcggcgtcggcccgctggttccgcctgctgcaacgggcgcag
gctttcgaaaagccggtctttcccataaccggcagcgatgccattgccgccggtcttgcg
cccggaccggagattggtcgggtgttatcgacactggaagacaactgggttcaagccaat
ttcaccttcagccgggaaaagcttctttcccggcttaaagaggcggtcacgccgtcaggt
taa
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