Agrobacterium vitis VAT03-9: RvVAT039_06410
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Entry
RvVAT039_06410 CDS
T08809
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_06410
Transporters [BR:
avv02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAT039_06410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCH63425
UniProt:
A0AAN2BSY8
LinkDB
All DBs
Position
1:complement(641966..644152)
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AA seq
728 aa
AA seq
DB search
MSFRGIRPVLLACTALCSFYAAVPVIAQEAAKTAENGGSNGQTELSTITVKGQKVVKGSV
EDTPVATHTSAEQLQKKQIDDVDDLGNTVEPSVTYVKNSKSVNIRGLEADRVLTTIDGIP
VPYFFDTVYSYGGGADTYDFNSLSSVDVLHSADSSRAGSGALGGALLLHTYEPEDLIGDG
KSFGGIAKLGYDGSDRSLTASGAIAKKFDNTSVLFQSSYKYGHETETTGDVGGTRGTRTE
ADPMSYNDRNFLFKIRQELEGGHTIGLTAEHYDYNSKKDYKSNTSYGTTYRAGDYDYIQD
KGRDRVSLDYVYDSTSADSWIDSAFATLYWQRATRVEGTSSYRLTAPIGIYDRSMESEQR
DYGFNGYANSDFSTGALNHKLTFGTDLRFSQSSYYLAGQDTCSVTYVSGCAYYHTNQSYS
PDVNSYKLGAFVEDKISLGNSPVSLTPGLRVDWYKEDPQETDTYKGTMPEGQDGAHLSPK
LRAAWQATPDAELYAQFSTAFKSPNAYQLYVDYDNSPLYRSIGNPDLKPETSWGFDVGAN
LGNEDFGGRISAFTTRYKNFIDTSDIIRTTGYVLGTYEYINRANVRISGVEIEGHKTFTN
GINLHGSMFYARGVDLDTDELLSTVAPLKAIVGVGYERQTWGADVSLVAAAAVSDDSSAS
TKPAGYGVVNLTGWWEPEQAKGLRLQAGVYNLFDKQYYDALEVKDVANANALYSEAGRYF
KIAISQKF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcggggaattcgacctgttctgcttgcctgcacggcactttgctccttctat
gcggccgtgcctgtcattgcgcaggaagcggcaaaaacggcggaaaacggcggctctaat
ggccagaccgaactttcgaccattaccgtcaagggccagaaggttgtaaagggttccgtg
gaagacacgccggtggcgacccatacctcggccgagcaattgcagaagaagcagatcgac
gatgtcgatgacctcggcaatacggtcgagccgagtgtgacctatgtgaagaattccaag
agcgtcaacattcgcggcctggaggccgaccgggtgctgacgaccatcgacggcattccg
gtgccctatttcttcgacacggtttatagctatggcggcggtgccgacacctatgatttc
aattcgctgtcgtcggtggacgtgctgcacagcgccgattccagccgcgccgggtccggc
gcactcggcggcgcgttgctcctgcatacctatgagccggaggacctgattggcgatggc
aagagctttggcggtatcgccaagcttggctatgatggctcggaccgctcgctgacggcc
tcaggcgcgattgccaagaaattcgacaatacctcggtactgttccagtcctcctacaaa
tacggccatgagaccgaaacaacaggcgatgtcggcggcaccaggggaacccggaccgaa
gccgatccgatgagctataacgaccgcaatttcctgttcaagatccgccaggagctggaa
ggcggtcatacgatcggcctgacggcggagcattacgactataattccaagaaggattac
aagtccaataccagctacggcaccacctatcgcgccggtgattacgattatatccaggac
aagggccgcgaccgggtttcgctcgattatgtctatgacagcacctctgcggatagctgg
atcgacagcgccttcgccaccctttactggcagcgcgcgacccgcgtggaaggcacatcc
agctaccggctgacggctccaatcggcatttacgaccggtccatggaaagcgagcagcgt
gattacgggttcaatggctatgccaattccgatttcagcactggcgctttgaaccacaag
ctgaccttcggcaccgatctccgcttcagccagagcagctattatctcgccggtcaggac
acctgctcagtcacctacgtatccggttgcgcctattaccacaccaaccagtcctattcg
cctgatgtcaattcctacaagctcggcgcttttgtcgaggacaagatttcgctgggcaac
agccccgtttcgctgacgcctggcctgcgcgtcgattggtacaaggaagacccgcaggag
accgacacttataagggaaccatgcctgaggggcaggatggtgcccacctctcgcccaag
ctgcgtgccgcctggcaggcgacgccggatgccgagctttacgcccagttctccacggcg
tttaaatcgcccaacgcctatcagctctatgtggattacgacaattcgccactctatcgc
tcaatcggtaatcccgatttgaagccggaaaccagctggggcttcgatgtcggtgctaat
cttggcaacgaggatttcggtggccggatcagcgcctttaccacccgctacaagaatttc
atcgacacctcggacatcatccgcaccaccggctatgtgcttgggacctatgaatatatc
aaccgcgccaatgtccgcatcagcggcgtcgagattgagggtcacaagaccttcaccaac
ggcatcaacctacatggctcgatgttctatgcgcgtggcgtggatctggataccgacgag
ctgttgagcacggtagcgccgctgaaagccattgtcggtgtcggctatgaacggcagacc
tggggcgcggatgtcagcctggtggccgccgctgccgtctccgacgactccagcgcctcc
accaagccagccggatacggcgtcgtcaatctgacgggctggtgggagccggaacaggcc
aagggcctgcgccttcaggctggtgtctacaatctgttcgacaagcaatattacgacgcg
cttgaagtgaaggacgtcgccaatgccaatgcgctttattccgaagcgggtcgttatttc
aaaatcgccatctctcagaagttctga
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