Agrobacterium vitis VAT03-9: RvVAT039_06490
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Entry
RvVAT039_06490 CDS
T08809
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_06490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_06490
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RvVAT039_06490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6040
Motif
Other DBs
NCBI-ProteinID:
BCH63433
UniProt:
A0AAN1WYF4
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All DBs
Position
1:651653..652498
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AA seq
281 aa
AA seq
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MDWLTDFKIPIGPTAKVVVDWLTANGAWFFDWLSHLISSSIDGVLFVLQYPNPLVTALAI
SIIAWLLRRSLLVAIFTFLGLALIINQGYFKETTETLALVLASTAVCMVIGVPLGILAAR
RAWIYALMRPVLDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAVPSPIRLTRLGIVS
TPSSLVEAAVAFGATPTQVLRKVELPYALPQIMAGLTQTIMLSLSMVVIAALVGAAGLGV
PVVRALNTVNIARGFEAGLCIVILAIILDRMFRIPSAGDDQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtggattggctgactgatttcaaaattcccatcggcccgaccgccaaagtcgttgttgac
tggctgacggccaacggagcctggtttttcgactggctctcccacctcatttcaagcagt
atcgatggtgttctgttcgtgctgcaatatcccaacccgctggtgacagcacttgccatc
agcattatcgcctggctgctgcgccgctcccttctcgtggcgatcttcacctttctcggc
ctggcgctgatcatcaaccagggctatttcaaggaaaccaccgagacgctggcgctggtt
ctggcctccaccgccgtctgcatggtgatcggcgtgccgctcggcatcctggccgctcgc
cgcgcatggatctacgccctcatgcgcccggtcctggacctgatgcagaccatcccgacc
ttcgtctatctcatcccggcgctgatcctgttcgggctcggcatggtgcccggtctgatc
gccacggtgatctttgccgtcccctcacccatccgcctgacccggctcggcatcgtctcc
accccatcctccctggtggaagctgccgttgccttcggggccacacccacccaggtgctg
cgcaaggtggaattgccctatgcgctgccacagatcatggcaggcctgacccagaccatc
atgctgtcgctgtccatggtggtgatcgccgcgctggtcggcgctgccggtctcggcgtt
ccggtggtgcgggcgctgaataccgtcaatatcgccagaggtttcgaagcgggcctttgt
atcgtcatcctggcaatcattctggaccggatgttccgcattccatcggcgggagatgac
caatga
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