Agrobacterium vitis VAT03-9: RvVAT039_08450
Help
Entry
RvVAT039_08450 CDS
T08809
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avv03021
]
RvVAT039_08450 (rpoH)
Transcription machinery [BR:
avv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RvVAT039_08450 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BCH63629
UniProt:
A0A120DB06
LinkDB
All DBs
Position
1:868930..869832
Genome browser
AA seq
300 aa
AA seq
DB search
MARNSLPSITAGEGGLNRYLDEIRKFPMLEPQVEYMLAKRYAEHGDRDAAHRLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGKIQAIEEGDLKPDQVTEIATKLKVSEEEVISMNRRL
SGDASLNAPIRASEGESGQWQDWLVDDHDSQEDTLIEQDELETRRNMLSRAMGVLNDRER
RIFAARRLAEEPVTLEELSSEFDISRERVRQIEVRAFEKVQDAVQKDALEQAKALRVVES
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagcttgccttcgattaccgccggtgaaggcggactgaaccgatacctg
gatgagatccgcaagttcccaatgctggaaccccaggtggaatatatgctggccaagcgc
tatgccgagcatggcgaccgcgatgccgcgcaccggcttgtcaccagccatttgcgcctc
gtggcgaagattgccatgggctatcgcggctatggcctgccgattggcgaagtcgtgtct
gagggcaatgtcggcctgatgcaggctgtcaaaaaattcgatcccgaacgcggcttccgg
cttgccacctatgcgatgtggtggatcaaggcctcgatacaggaatatatcctgcgctcc
tggtcgctggtgaagatgggcacgaccgccaaccaaaagcggctgttcttcaacctgcgc
cgcctgaagggcaagatccaggccattgaggaaggcgacctgaagccggatcaggtcaca
gaaatcgccaccaagctgaaggttagcgaggaggaagtgatttccatgaaccgccgcctg
tcaggcgatgcctcgctgaacgcgccgatccgcgccagcgaaggtgaatccggccagtgg
caggattggctggtggacgatcatgacagccaggaagacacgctgatcgagcaggatgag
ctggaaacccggcgcaacatgctgtcgcgcgccatgggcgtgctgaacgaccgtgaacgc
cgcatcttcgccgcccgccgcctggccgaagagccggtgacgctggaagaactgtcgtcc
gagttcgacatcagccgcgaacgtgtgcgccagatcgaagtgcgcgcctttgaaaaggtt
caggatgcggtccagaaggacgcgctggaacaggccaaggcgttgcgggtggtcgagtcc
tga
DBGET
integrated database retrieval system
