Agrobacterium vitis VAT03-9: RvVAT039_09410
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Entry
RvVAT039_09410 CDS
T08809
Symbol
serA
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00260
Glycine, serine and threonine metabolism
avv00270
Cysteine and methionine metabolism
avv00680
Methane metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
avv01230
Biosynthesis of amino acids
Module
avv_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RvVAT039_09410 (serA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RvVAT039_09410 (serA)
00270 Cysteine and methionine metabolism
RvVAT039_09410 (serA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avv04147
]
RvVAT039_09410 (serA)
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
RvVAT039_09410 (serA)
1.1.1.399 2-oxoglutarate reductase
RvVAT039_09410 (serA)
Exosome [BR:
avv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAT039_09410 (serA)
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GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
F420_oxidored
ACT
NAD_binding_2
RS_preATP-grasp-like
KARI_N
UPF0020
Motif
Other DBs
NCBI-ProteinID:
BCH63725
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All DBs
Position
1:complement(967524..969119)
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AA seq
531 aa
AA seq
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MAPRVLVSDELSETAVQIFRDRGVEVDFQPQLGKDKDKLAEIIGNYDGLAIRSATKATEK
LIAAATNLKVIGRAGIGVDNVDIPAASRRGIIVMNTPFGNSITTAEHAIALMFAVARQLP
AADASTQAGKWEKSKFMGVEITGKVLGVIGAGNIGGIVCKKAIGLGMHVIAYDPFLSAER
AQEMGVKKVELDELLAQADFITLHVPMTDKTRGILGKENLAKTKPGVRIINCARGGLVDE
AALAEAIKSGHVAGAGFDVFEVEPAKESPLFGLPNVVCTPHLGASTTEAQENVALQVAEQ
MSDYLVNGAVSNAINMPSITAEEAPLLKPFIRLADVLGAFVGQVTDGAIKEIEILYDGQT
ATMNTKALTSALLAGLIRAQVSDVNMVSAPIMIKEKGIVLSEVKRDKTGVYDGYIKLTVT
TEKQTRSIAGTVFSDGKPRFIQIKGINLDADVGPHMIYISNTDVPGMIGFMGTTLGNAGV
NIANFQLGREKESGDAIALLYVDGPVEQAVLDQLTANAAIKQARLLTFAVE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcgcgttctcgtctctgatgaattgtcagaaaccgccgtccagattttccgc
gatcgcggcgttgaagtggatttccagccgcagctcggcaaggataaggacaaactggcc
gagatcatcggcaattacgatggtctggccatccgttcggccaccaaggccacggaaaag
ctgattgctgccgctacaaacctcaaggtgattggtcgcgctggtatcggcgtcgataac
gttgatattccggccgcctcgcgccgtggtatcattgtgatgaacacgcctttcggcaat
tccatcacgacggctgaacacgccattgcgctgatgttcgccgttgcccgccagcttccc
gctgcggatgcctccacgcaggctggcaagtgggaaaagtcgaagttcatgggcgttgaa
atcaccggcaaggtgctgggtgtgatcggcgctggcaatatcggcggtattgtctgcaag
aaggcaattggcctgggcatgcatgtcatcgcttacgaccctttcctgtcggctgaacgc
gcccaggaaatgggcgtgaagaaggttgagctggacgagctgttggcccaggccgatttc
atcaccctgcacgtgccgatgactgacaagacccgcggcattctgggcaaggaaaacctc
gccaagaccaagcccggcgttcgcatcatcaactgcgcccgtggtggtctggtggatgag
gcagctttggccgaagccatcaagtccggccatgttgccggtgccggtttcgacgtgttt
gaagtcgagcctgccaaggaaagcccgctgtttggcctgccaaacgtggtttgcaccccg
catctgggcgcatccaccaccgaagcacaggaaaatgttgctttgcaggtggccgagcag
atgtcggactatctggtcaacggtgccgtttccaacgccatcaacatgccatcgatcacg
gcggaagaagcaccgcttctgaagcccttcatccggcttgccgatgttctcggcgctttc
gtcggccaggtcaccgatggtgccatcaaggaaatcgaaatcctctatgacggccagacg
gccaccatgaacaccaaggcgctgacgtctgcgctgctggcaggcctgatccgcgcccag
gtttcggatgtcaacatggtgtcggcgccaatcatgatcaaggaaaagggcatcgtgctg
tctgaggtcaagcgtgacaagaccggcgtttacgacggttacatcaagctgaccgtgacc
accgaaaagcagacccgctcgattgccggtacagtgttctcggatggcaagccgcgcttc
atccagatcaagggcatcaacctcgacgccgatgtcggtccgcacatgatctacatttcc
aacaccgacgttcccggcatgatcggtttcatgggcaccacgctcggcaacgctggcgtc
aacatcgccaacttccagctgggccgcgaaaaggaatccggcgacgcgattgcgctgctc
tatgtcgatggtccggtcgaacaggccgtgctcgatcagttgacggccaacgcggcgatc
aagcaggcccggcttctgacctttgcggtcgaataa
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