Gillisella vitis VAT03-9: RvVAT039_11970
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Entry
RvVAT039_11970 CDS
T08809
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
avv
Gillisella vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_11970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_11970
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RvVAT039_11970
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_25
AAA_22
AAA_16
RsgA_GTPase
NACHT
TsaE
AAA_29
nSTAND3
nSTAND1
RNA_helicase
ATP-synt_ab
AAA_13
AAA_18
AAA_24
AAA_10
Motif
Other DBs
NCBI-ProteinID:
BCH63981
LinkDB
All DBs
Position
1:complement(1277282..1279168)
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AA seq
628 aa
AA seq
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MAECADLLYVDNISVSFPLLGASIQAVKSFSMVLRPGKVTALVGESGSGKSVLGRSIMGI
ESNLAQINGRVVFNDPQKAAQVDLLSLPYDGRQIRQIRGNRIGMIFQEPMTSFSPVHTVG
NQIEEVLRVHTALSPRERQERLEEMLGLVGFNDPARVATMYPFELSGGMRQRAMIAMALI
CNPALLIADEPTTALDVTIQAQILKLLKELQEKLGMAILLITHDLGVVASLADEVVVIYR
GEVMESGPVEAIFSAPQHAYTKGLMQAVPHFDMDRNERLKPLREIRVDTGRLMDKCRVPS
GGDGVLLSVRNISKSFQSKGSNGFFSRPSSPTLAVNDVSFDIFRGETLGLVGESGCGKTT
LSKILMRGVTADHGTAVYHGADGPLDMLKAEGSKLQDLRTRIQMVFQDPVSSLSPRMTVR
GIISEPLEIHERGNRAARLDLVNRLIHAIGLPETALGRYPHSFSGGQRQRIGIARSLALG
PDLVICDEPVSALDVSVQAQILNLMKDLKSELGLTYLFISHNLAVVNYMADRVAVMYAGR
IVEIAPCEVIMRDPVHPYTKKLLAAVPLPNLDHPMDFNLIGEPSLAAKKRWARHFHDEGD
PATLAHADLGGGHLVLARREVDARELRS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatgcgcagatctgctttatgtggataatatcagtgtgtcttttcccctgttg
ggcgcaagcattcaggcggtcaagtctttcagcatggtgctgcggcccggcaaggttacg
gcgctggtcggtgaatccgggtcgggtaaatccgtgcttggacgctcgatcatggggatc
gagtccaacctggcacagatcaatggccgggttgtttttaatgatccgcaaaaggcagcc
caggtcgatctgctgtccttgccctatgatggtcgtcagatccgccagattcgcggcaac
cggatcggcatgatcttccaggagccgatgacctcgttttcgccggtccataccgtcggc
aatcagatcgaggaagtgctgcgggtccacaccgcgctttcgccgcgtgagcgccaggaa
cggctggaagaaatgctgggtctggtcgggttcaacgacccggcccgtgtggcaaccatg
tatccgttcgaactgtccggcggcatgcgccagcgggcgatgattgccatggcgctgatc
tgcaatccggcgctgctgattgctgatgagccgaccacggcgcttgatgtcaccatccag
gcacagatcctcaagcttttgaaagaattgcaggaaaagctcggcatggcgatcctgttg
atcacccacgatctcggtgtcgtcgccagtctggctgatgaagtcgtggtgatctatcgc
ggcgaagtgatggaatccggcccggttgaggcaattttcagcgcgccgcaacatgcctat
accaagggcctgatgcaggccgtgccgcatttcgacatggaccgcaatgagcgcctgaaa
ccgcttcgggaaatccgcgtcgataccggacgattgatggacaagtgtcgtgtgccgtcc
ggcggcgatggtgtgctgctttcggtgcgcaatatttccaaatccttccagtccaagggc
tcgaacgggtttttctcgcgcccgtcttcgccgactttggccgtcaacgatgtctccttc
gatatttttcgcggtgaaaccttaggcttggtgggcgaaagcggttgcggcaagaccacg
ctcagcaagattttgatgcgcggtgtaaccgctgatcacggtacggctgtctatcatggt
gccgatggcccgctggatatgctgaaggctgaaggatcaaagctgcaagacctgcgcacc
cgcattcagatggtgtttcaggaccctgtctcttccctgtcaccgcgcatgacggtgcgt
gggatcatcagtgaacccttggaaattcatgagcgtggcaaccgggccgctcggctggat
ctggtcaaccggctgatccatgcgattggcctgccggaaaccgcgctgggccgctatccg
cacagtttttccggcggtcagcggcagcggattggcattgcccgttcactggcgctgggg
ccggatctggtgatctgcgatgagccggtctcggcattggatgtctcggtgcaggcgcag
atcctcaatctaatgaaggatttgaagagtgagcttggcctgacctatctgttcatttcc
cacaatctggccgtggtgaattacatggccgaccgggtggctgtgatgtatgcgggccgt
attgtcgagattgccccttgcgaggtgatcatgcgcgatccggtccatccctataccaag
aaattgctggcagcggttccgctgcccaacctggatcatccgatggatttcaacctgatc
ggagaaccgtcgctggctgccaaaaagcgctgggccaggcattttcacgatgaaggtgat
ccggcaacgcttgcccatgccgatctgggtggtggccatctggttttggcccgccgtgag
gtggatgcaagggagttgcgctcgtga
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