Agrobacterium vitis VAT03-9: RvVAT039_12080
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Entry
RvVAT039_12080 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_12080
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_12080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avv02035
]
RvVAT039_12080
Bacterial motility proteins [BR:
avv02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAT039_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP_N3
MCPsignal
HAMP_2
McpB_HAMP_2
HAMP
IFT57
Motif
Other DBs
NCBI-ProteinID:
BCH63992
LinkDB
All DBs
Position
1:complement(1292243..1294168)
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AA seq
641 aa
AA seq
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MSLYTQFKKSSRAQLAITEIDNLTRSMADGDTSRRAQVDIATGEAKMLLDAVNRLLDAAM
RPVSDLRDATTRMSVDHDKGDIDAILPVDAFKGDLSVMAKGINEMVAGHISVKKKAMACV
QEFSEGNFEAALERFPGKKAFINDTVETLRGNLKGFIAEMNRMSAEHDKGDIDVFVPVER
FKGDFAVMAKGVNDMVNGHIVVKKKAMACIKEFGEGNFDAALEQFPGKKAFINETVETLR
SNFRDIVTEIRRLTVASTEGNLSERGVATRFVGDFSKMVSGINGMLDAILLPIGEGNRVL
NLVSTGDLTEHVEIACEGDHQKMKDAINSLVDNLTAFATGVASAADQVTSGSQALSSTSE
QLSQGATEQASAAEEASASMEQMAANIKQTADNASQTEKIARQSAKDAELSGEAVDKAVN
AMRTIAEKISIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAAGE
ISGLSSETVKAATSAGEMLHRLVPDIRKTAELVTEISASCREQDLGASQINEAIQQLDQV
TQHNASASEEMSATSEELASQAEELQSSLTFFQTSDNGDSQARKSRVSIAPVRKAAPSAQ
PVRKPMANRSVAAQQARAKGFALDLSMGGPDAEDDRFHQLT
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtccttatacacacagttcaaaaaatcctcccgagcacagctagcaattacagagatc
gacaatctgacgcgcagtatggctgatggcgatacatcgcgtcgcgcgcaggtggacatt
gcgaccggcgaagcaaagatgctgctggacgcggtcaacagattgctcgacgcagctatg
cgtccagtctccgacctccgcgatgccacgactcgcatgtcagtggaccacgacaagggc
gatattgatgcgatccttccggtcgatgccttcaagggtgatctttccgttatggcgaag
ggcatcaacgaaatggtcgctggccatatatcggtaaaaaagaaggcgatggcctgcgtt
caggagttcagcgaaggaaattttgaggccgcgcttgagcggttcccgggcaagaaggca
ttcatcaatgatacggtggaaactttgcgtggcaatctcaagggctttatcgccgaaatg
aaccggatgtccgccgagcacgataagggtgatatcgatgtcttcgtgcctgtcgagcgg
tttaaaggcgactttgcggtgatggcaaagggtgtcaacgacatggtcaatggccatatc
gttgtgaagaaaaaggcaatggcttgcatcaaagaattcggcgaaggcaattttgacgcg
gcgctcgagcaatttccaggaaagaaggcgttcatcaacgaaacggtagaaacgctgagg
agcaatttccgagacatcgtcaccgaaatccgccgtttaaccgttgcgtcgacggaaggc
aatttgagcgagcgaggtgtcgccactcggtttgtcggagatttttccaagatggtttca
gggataaacggcatgctggatgccatcctgttgccgattggtgagggcaatcgcgtactt
aatctcgtcagcaccggcgatttgacggaacatgtggagattgcctgtgaaggcgaccat
caaaaaatgaaggatgcaatcaattcattggtcgataacctgacggcctttgcaactggt
gttgccagtgcggctgatcaggtgacgagcggcagccaggcgctctcctccacctccgag
cagctctcgcagggcgcgacagagcaagcctctgctgctgaagaggcgtcggcgtccatg
gagcagatggccgctaatatcaagcaaactgccgataatgcatcacagacagagaagatt
gcccgccagtctgcgaaagatgccgagttatccggcgaggcggttgataaagccgtcaat
gcgatgcgaacgatcgcagaaaaaatttccatcgttcaggaaatcgctcgtcagacagat
ctcctggcgctgaacgccgcggttgaagccgcccgcgcaggtgagcatggcaaaggcttt
gctgttgttgcatccgaagtccgcaagcttgctgaacgttcacaggccgcagcaggagag
atcagcggtctgtctagcgagaccgtcaaggcagcgacctctgctggtgaaatgctgcac
cggctcgttcctgatattcgcaagaccgccgaactcgtcacggaaatttcggcctcctgc
cgtgaacaggatttgggagcctcccagataaacgaggccattcagcaattggaccaggtc
acgcagcacaatgccagtgcttcggaggaaatgtcggccacctctgaagagcttgcgtct
caggcggaagaattgcagtcttcgctgactttcttccagaccagtgacaatggcgattcc
caggcacgcaaatcgcgggtgtcaattgcaccagttcgaaaggcagcgccatcggcccag
ccggtccgcaagccaatggcaaaccgatccgttgcggcgcagcaagcccgcgcgaagggc
tttgctctcgatctttccatgggtggccctgacgcagaagatgatcgctttcatcaactc
acttaa
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