Agrobacterium vitis VAT03-9: RvVAT039_14210
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Entry
RvVAT039_14210 CDS
T08809
Name
(GenBank) DUF490 domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_14210
Transporters [BR:
avv02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAT039_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BCH64205
UniProt:
A0AAN2BTP9
LinkDB
All DBs
Position
1:1534523..1538737
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AA seq
1404 aa
AA seq
DB search
MSALKTLFSGLGRILAYGLLVLAAMLVVALTLIGTTQFGSRFIGDFVASLVSKPNRIIAV
DGISGLLDGHLRVDTITVSDANGAYGRIQDLSIDWSPLALMSRRFEASQIKAASLTLARK
PLPAEETATEASSSNGFSLPVDIRIERVSVPEIRLEQTLLGTAAKLALDGNVEAERGSEA
NQQSITSQLTVSRADLPQANLLAQLAYAPQQNRLDVDATLQEPKGGILANLLQLPDDPAL
AITVKGGGPINDWKGSLAATLDGTPRLDITATHRLAADGRHVTINGDGAFDSLLPANLRD
LFAGKTMIDIAARLSDDGALSVEKGSVETGSLSLAASGTYTPKGENSLHATLTGKNGPAA
IRWPLDDGTLAAQVSGLTFSLTGAAEAAKLETTAALESLTLPQGAFGDIALKASAPAFNL
TTRSGSIDTTLTVQQAQLTDPTLARAVKAPLTLKAPISVSPQQIAAQPLTIESPALGGSV
TAAYTIASKAVEAQYTLFARPEALPQAVTEKLVGTPGGTEQSNMVKLSGEARYSAGDGIV
IPGFTLETRLLNASGKLSFVRQQLATTLSGMITDLSILQANASGKAAFELQANGPINALQ
TNGTITIDAAKLAGRALTGFSMAAKADLTRGAPSATLTAQGALDGKPVRSNLNLTSKDGV
IALPDLSLTVGDNSLNGVLNFSRALLPSGSVDFDFPDLGLLAALGGQTASGDLKGSIRLD
EANGKIAARIKAEGTAIRQGSTTIAQPSVDVTTNDLQSLALQGMVKADRISTGSALVEQL
ALQFDRRGTRTDIDLSGRYDNAPLTGKALVQQDGNSIGIALQDFAVSPRGIPVTLARPTD
ITVENGTATIDTLTIKAGSGTITVAGKAGAALDMTAQINALPASLANTFSANLGATGTLS
GKITATGSTSAPKIAYDLRLDDASVTQMQSAGVPPLAITASGTFADNRLSVDSRVTGGGG
LNVTGGGSLTLAGDKPINMAFKANLPLSALQGLLTKQGLTAEGTANGDIRIGGTLSSPAL
SGTISTAKARLIDVKHNIALEQLAVDIALTGDQARINSVTGRISAGGRVSATGTIDLKGQ
GLPSDLTIKLDNAIYIDGTLVTATVNGSMGLKGPLLDGPTLSGKLTLDKTSITIPSRLPG
SIAQLDIKHKNAPADVRRQTAILNPEKTRDGSSSPILLDLQIAAPSQIFVRGRGIDAELN
GTVTIKGSIAAPQVSGGFTMRRGRMVILTKRLDFSSGKITFSGGLIPVVDFEATSTSGST
TLTAKVSGVATDPDISFSSAPALPQDEVLAQLIFGQSMAKLSPLQIAQLADAVGQLGGGN
STSLFNSLRSAVGVDDLDISTDSKGNTQFSAGKYLNDKTYLEFQQGSSGSKAVINLDVGR
GFKLKGEAGASGSSGGGVFYEKEY
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcactcaaaaccctattctcaggccttggccgcattctcgcctatggtttgctg
gtgctggccgcgatgctggtcgtggcgctgacgctaatcggcacgacgcaattcggcagt
cggttcatcggcgatttcgtcgcctcgctggtgtcgaagccaaaccggatcatcgccgtg
gacgggatcagcggcctgctggacgggcatttgcgggtggacacaatcaccgtttccgac
gcgaacggtgcttatggccgaattcaggatctctccatcgactggtcgccgctggcgctg
atgtcacgccgtttcgaggcctcgcagatcaaggccgcctccttgacattggcccgcaag
cccttgccggctgaggaaacggcgacagaagcctccagtagcaatggcttcagcctgccg
gtggatatccgtatcgagcgggtgtccgtgccggagatccggctggaacaaacgctgctc
ggcactgcggccaaactggctttggacggcaatgtcgaggctgaacgaggcagtgaagcg
aaccagcaatccatcacctcgcagttgacggtgagccgtgcagatctgccgcaggcaaac
ctgttggcccagctcgcctacgcgccgcagcagaaccggctggacgtcgacgccaccctg
caggagccaaagggcggaatcctcgccaacctgctgcaattgccggatgatccggcgctt
gccatcacggtcaagggcggcggtccgatcaacgactggaaaggctcgctggcggcaacg
ctcgacggcacaccgcgattggacatcaccgcaacgcatagactggccgcagacggtcgc
catgtgaccatcaatggcgacggtgccttcgatagcctgttgcccgccaatctccgcgac
ctgtttgccggcaaaaccatgatcgacattgccgcccgtctttccgatgacggtgccttg
agcgtggaaaaaggcagcgtcgagaccggcagcctgtcgcttgccgccagcggcacctat
acgccgaaaggcgaaaattcccttcacgcgacactgaccggcaagaatggccctgccgcg
atccgttggccgctggacgatggcaccctcgccgcccaagtctccggcctgacattcagc
ctgaccggggctgccgaagcggcaaaacttgaaaccaccgcggcgctggagagcctgaca
ctgccgcagggcgcatttggcgatatcgcccttaaagcaagcgcgcctgctttcaacctg
accacccgttccggcagcatcgataccacactgaccgtgcagcaagcgcagttgacggac
ccgacgttggcgcgcgccgtgaaggcacctctgaccctcaaggcaccgatttcggtcagc
cctcagcagattgccgcccaaccgctcaccatcgaaagcccggcgcttggcggcagcgtg
acggctgcctataccatcgccagcaaggccgtggaggcacaatatacactgtttgcgcgg
cctgaagcgctgccacaagccgtgacggaaaagctggtgggaacgcctggtggcaccgag
caaagcaatatggtgaagctttccggcgaggcacgctattccgcaggtgatgggattgtc
attcccggttttacgctggaaacacggctgctgaacgcttcgggcaaactgtcttttgtc
aggcagcagctggccaccacactctcggggatgatcaccgatctcagcatcttgcaggcc
aatgcatcgggcaaggccgcgttcgagctccaggccaatggtcccatcaatgccttgcag
accaatggcacgatcaccatcgatgccgcaaagcttgctggccgcgccctcactggcttt
tccatggcggcgaaagccgacctgacacgcggcgcgccctctgcaacgctgaccgcgcaa
ggcgcgctggatggcaagccggtgcggtccaatctcaacctcacctccaaagacggcgtc
atcgccctgccggatctgagcttgacggtgggtgacaacagcttgaacggcgtcttgaac
ttttcccgtgcgctgcttcccagcggttctgtcgattttgactttcccgatctcggcctg
ctggccgcccttggcggacagaccgcatcgggcgatctgaaaggctccatcagactggat
gaggccaatggcaagattgccgcccggatcaaggccgagggcaccgccattcgccagggt
tcgacaacaatcgcgcagccgtcggtcgatgtgaccaccaacgacctccagtcgctggcc
ttgcagggcatggtcaaggcggaccggatctccactggctctgcccttgtggaacagctg
gcgcttcagttcgaccggagaggaacccgcaccgatatcgacctttcgggacgatacgac
aatgcacctttgaccggaaaagcgctggtgcagcaggatggcaatagcatcggcattgcc
ctgcaggattttgccgtcagcccacgcggtatcccagtgacgctggcccggcccactgat
atcaccgtggaaaatggcaccgcaacaatcgacacgctcaccatcaaggccggcagtggc
acaatcacggtcgctggcaaggcaggcgcggctctggatatgacagcgcagatcaacgcg
ctccccgcctcgcttgccaatacattttcggccaatctgggcgcgaccggcacactctcc
ggcaagatcaccgccaccggcagcacatccgcgccgaagatcgcgtatgacctgcgcctc
gacgatgccagcgtcacgcagatgcagtccgctggcgtgccacctctggcgattacagcg
tccggcacctttgcggacaatcgcctgtccgtggacagccgcgtcaccggtggcggcggc
ctgaatgtcacaggcggcggctcgctgacgctagcaggtgacaagcccatcaacatggcc
ttcaaggctaatctaccgctcagcgcattgcagggtctattaaccaagcaaggattgacg
gcggaaggcacggccaatggcgatatccgcattggcggcaccctgtcctccccggcgtta
tccggtaccatcagcacggccaaggcccggctgattgatgtgaaacacaatatcgctctt
gagcaattggccgtggacattgccttgaccggcgatcaggcccggatcaactccgtcacc
ggcaggatttccgccggaggcagagtgtcggcgaccggcacgatcgacctgaaaggtcag
ggattgcccagcgacctgacaatcaagctcgacaacgccatctacatcgatggtaccttg
gtcaccgcgaccgtcaacggcagcatggggttgaaaggccccttgctggatggaccgacc
ctgtccggcaagctgacactggacaagacctcgatcaccattccgtcccggctgccggga
tcgattgcccagctcgacatcaagcacaagaacgctccggccgacgtgcgccgccaaacg
gcaattctcaatccagagaaaacgagggatggcagtagctcgccgattctgctcgatctg
caaatcgcggcaccctcgcaaatcttcgtgcgcggacgcggaatcgacgccgaactgaac
ggaaccgtgaccatcaagggcagtatcgcagcaccgcaagtctcgggtggcttcaccatg
cgtcggggccggatggtcattctcaccaagcggctggatttcagctcaggcaaaattacc
tttagcggtggccttatcccagtcgtcgacttcgaggctaccagcacatcaggcagcacg
acgctgacagccaaggtatccggcgtggcgaccgacccggatatcagcttttcatccgct
cccgccctgccgcaggacgaggtcctcgcccagcttattttcggccagtcgatggcgaaa
ctgtcgccgctgcaaattgctcaattggcggatgccgtcggtcagttgggcggtggcaat
tcgacatccctgttcaacagtcttcgcagcgccgttggcgttgacgatctcgacatcagt
accgattccaagggcaatacccagttcagcgccggaaaatatctgaacgacaaaacctat
ctcgaattccagcagggcagcagcggcagcaaggccgtgatcaacctggatgtcggccgt
ggcttcaagctgaaaggcgaggctggcgccagtggatcgagcggcggcggtgtgttctat
gagaaagaatactag
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