Agrobacterium vitis VAT03-9: RvVAT039_14490
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Entry
RvVAT039_14490 CDS
T08809
Symbol
sucD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00020
Citrate cycle (TCA cycle)
avv00640
Propanoate metabolism
avv00660
C5-Branched dibasic acid metabolism
avv00720
Other carbon fixation pathways
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
Module
avv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
avv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RvVAT039_14490 (sucD)
00640 Propanoate metabolism
RvVAT039_14490 (sucD)
00660 C5-Branched dibasic acid metabolism
RvVAT039_14490 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RvVAT039_14490 (sucD)
Enzymes [BR:
avv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RvVAT039_14490 (sucD)
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GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCH64233
UniProt:
A0A1S2EBY0
LinkDB
All DBs
Position
1:complement(1573451..1574353)
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AA seq
300 aa
AA seq
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MSILINKDTKVLVQGLTGKTGTFHTEQALAYYGTKMVGGIHPAKGGSNWTGSKGETLPIF
ASVAEGKDVTGANASVIYVPPAGAAAAIIEAIEAEIPLIVCITEGIPVADMVKVKARLDK
SKSRLIGPNCPGVMTPEECKIGIMPGSIFRKGSVGVLSRSGTLTYEAVFQTSNEGLGQTS
AVGIGGDPVKGTEFIDILEMYLADEATKSIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPM
VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIEAMESAGIRVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctgatcaataaagacaccaaggttctcgtacagggcctgaccggcaagacc
ggcaccttccacaccgagcaggctttggcctattacggcaccaagatggttggcggtatt
caccctgccaagggcggcagcaactggaccggctccaagggtgaaaccctgccgatcttt
gcgtctgttgctgaaggcaaggacgtcaccggcgccaatgcatcggtgatctacgttccg
ccagccggtgctgctgctgcgatcatcgaagccatcgaagctgaaattccgctgatcgtc
tgcatcacggaaggcattccggtcgccgacatggtcaaggtcaaggctcgcctcgacaag
tccaagtcgcgcctgattggcccgaactgcccaggcgtgatgacgccggaagaatgcaag
atcggcattatgccgggctcgatcttccgcaagggttcggttggcgtgttgtcgcgttcc
ggcactttgacctatgaggcagtgttccagacatcgaatgaaggcctcggccagacctcg
gctgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacattctggaaatg
tacctcgctgacgaagccaccaagtcgatcatcatgatcggtgaaatcggtggttcggct
gaagaagaagccgcacagttcctcaaggacgaagccaagaagggccgcaagaagccgatg
gttggcttcatcgccggtcgtacggctcctcccggtcgcaccatgggtcacgcaggcgct
gtgatctccggcggcaagggcggcgcggaagacaagatcgaagccatggaatcggcgggc
atccgggtttcgccctcgccagcccgccttggcaagacgctggttgaagttctcaagggc
tga
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