Agrobacterium vitis VAT03-9: RvVAT039_16150
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Entry
RvVAT039_16150 CDS
T08809
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00900
Terpenoid backbone biosynthesis
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RvVAT039_16150
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
avv01006
]
RvVAT039_16150
Enzymes [BR:
avv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RvVAT039_16150
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RvVAT039_16150
Prenyltransferases [BR:
avv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RvVAT039_16150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCH64399
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All DBs
Position
1:complement(1750244..1751140)
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AA seq
298 aa
AA seq
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MFDDHLRDTAARVQALLTELLQPEPLSDEIARPGQLLAAMRHAVLNGGKRLRPFLVVESA
RLFRGQDDAALRVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDS
LLTFAFDIIAAPQTTLPDAAKTALVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIVTL
QAMKTGALLRFACEAGPVIAGASNEDRQRLREFGELIGRAFQLADDLLDLTADAATMGKA
TGKDAGRGKGTLVALKGQAWAEAELDRLVDQAVALLSPYGERAAVLMAAARFVANRKN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgatcatctccgcgatacagccgcgcgcgtccaggcgctgctgaccgagctt
ttgcagcctgagcctctatcggatgaaatcgccaggcccggtcaattgctggcggcaatg
cgccatgccgtgctgaacggcggcaagcggctacggccatttctggtggtggaaagcgct
cggctgtttcgcggccaggacgatgccgccttgcgggttggggcggcgctggaatgcctg
cattgctactctctcgtgcatgatgatctgcccgccatggatgacgacgatctgcgtcgt
ggccagccaactgtgcatatcgcctttgacgaggcgacggccattctggccggtgacagc
ctgctgacttttgcctttgatatcattgctgcaccacaaaccacgctgcccgacgctgcc
aagaccgcgctggttctggcgttggcgcgggctgccgggcttggtggcatggcgggcggg
caggcgctggatctagccgcggagaaacaggctccggacgaggctggcatcgtgacattg
caggcgatgaaaaccggcgcgctgttgcgcttcgcctgcgaggccgggccagtgattgcc
ggggcatcgaacgaggaccggcagcggcttcgcgagttcggcgagttgatcggccgggct
ttccagcttgctgacgatctcctcgatttgacggctgatgctgcgaccatgggcaaggcg
acaggcaaggatgccgggcgcggcaaggggacactcgtcgcactgaagggccaggcctgg
gcggaagccgagctggatcggctggtcgatcaggcggtcgcgttgctgtctccctatggc
gaacgcgccgcagtgttgatggctgccgcccgttttgtcgccaatcgcaagaattga
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