Agrobacterium vitis VAT03-9: RvVAT039_17020
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Entry
RvVAT039_17020 CDS
T08809
Symbol
pckA
Name
(GenBank) phosphoenolpyruvate carboxykinase [ATP]
KO
K01610
phosphoenolpyruvate carboxykinase (ATP) [EC:
4.1.1.49
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00010
Glycolysis / Gluconeogenesis
avv00020
Citrate cycle (TCA cycle)
avv00620
Pyruvate metabolism
avv00710
Carbon fixation by Calvin cycle
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RvVAT039_17020 (pckA)
00020 Citrate cycle (TCA cycle)
RvVAT039_17020 (pckA)
00620 Pyruvate metabolism
RvVAT039_17020 (pckA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RvVAT039_17020 (pckA)
Enzymes [BR:
avv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.49 phosphoenolpyruvate carboxykinase (ATP)
RvVAT039_17020 (pckA)
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Gene cluster
GFIT
Motif
Pfam:
PEPCK_ATP
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BCH64486
UniProt:
A0AAN1X069
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Position
1:complement(1851155..1852765)
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AA seq
536 aa
AA seq
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MEELGVNNSRLGIETIGLGKAANVHYNLLPAALYEHAIRNGEAVLTADGALLAETGQHTG
RSPKDKFILRDANTDSQIWWDNNKPMSKEHFDILHQDMLAHVAGKTLFVQDLIGGADAAN
ALPTRVVTELAWHSLFIRNLLIRPERAALADFEAKFTIIDLPSFKADPARHGCRTETVIA
CDFTNNIVLIAGTYYAGEMKKSVFTALNYMLPAKQVMPMHCSANVGPAGDSAVFFGLSGT
GKTTLSADPARTLIGDDEHGWGEDGIFNFEGGCYAKTIRLSAEAEPEIYATTKRFGTVLE
NVVLDENRVPDFNDGSKTENTRCAYPLNFIPNASPTGRAGHPKTIIMLTADAFGVMPPIA
KLTPEQAMYHFLSGYTAKVAGTERGVTEPEATFSTCFGAPFMPRHPAEYGNLLKELIARH
EVDCWLVNTGWTGGAYGIGSRMPIKATRALLTAALSGELKKVEFRTDANFGFAVPVSVEG
VDTSILDPRSTWANGADYDAQAKKLVGMFIANFEKFEAHVDSNVRDAAPVLAVAAQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttggagtgaacaatagccgtcttgggatcgagaccattggcttgggcaag
gccgccaatgtccattataatctgctgcccgccgccctttatgagcatgcgatccgcaat
ggtgaagccgtgctgacagcggacggcgcgcttttggccgagaccggacagcatacgggc
cgctcgcccaaggacaagttcatcctgcgtgacgccaataccgatagccagatctggtgg
gacaataacaagccaatgtcgaaagagcatttcgacatcctgcatcaggacatgctggcg
catgtggctggcaagaccctgttcgtccaggatctgattggcggcgccgatgccgccaac
gctttgccaacccgcgtggtaacggaacttgcatggcattcgctgtttatccgtaacttg
ctgattcgtccggaacgcgccgcgcttgccgatttcgaagcgaaattcaccattatcgac
ctgcccagcttcaaggctgatccggcccgtcatggctgccgcaccgaaacggtcatcgcc
tgcgacttcaccaacaatatcgtgctgatcgccggtacctactatgccggtgaaatgaag
aagtcggtgttcacggcgctcaactacatgctgcccgccaaacaggtcatgccgatgcat
tgctcggccaatgttggcccggctggcgattcggctgtgttcttcggtctgtccggcacc
ggcaaaaccacgctgtccgctgatccggcccgcacgctgatcggcgatgatgagcatggc
tggggcgaagacggcatcttcaacttcgaaggcggctgctacgccaagaccatccgtctg
tcggcagaagctgagccggaaatctacgccaccaccaagcggttcggcacggtgctggaa
aatgtcgttctggatgaaaaccgggtcccggatttcaacgatggctcgaagaccgagaac
acccgttgtgcctatccgctgaacttcattcccaacgcatcacccaccggccgcgccggt
catccgaagaccatcatcatgctgaccgcagatgccttcggcgtcatgccgccgatcgcc
aagctgaccccagaacaggcgatgtaccacttcctttccggctacaccgcgaaagtggct
ggcacggagcgcggcgtaaccgagccggaagcaaccttctcgacctgcttcggcgcaccg
ttcatgcctcgccatccggcagaatatggcaatctgctcaaggagttgattgcgcgccat
gaagtggattgctggctggtcaacaccggctggaccggcggtgcctacggtatcggcagc
cgtatgccgatcaaggcaactcgggcgctgctgacggcggctctctccggagagttgaag
aaggtcgagttccgcaccgatgccaatttcggcttcgcggtaccggtttctgtcgaaggc
gtcgataccagcattctcgacccccgctcgacctgggcaaatggggctgactatgacgcg
caggccaagaaactggtcggcatgttcatcgccaatttcgagaaattcgaagcccatgtg
gacagcaatgttcgcgatgcggctccggttctggctgttgctgcgcagtaa
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