Gillisella vitis VAT03-9: RvVAT039_17550
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Entry
RvVAT039_17550 CDS
T08809
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
avv
Gillisella vitis VAT03-9
Pathway
avv03030
DNA replication
avv03430
Mismatch repair
avv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RvVAT039_17550
03430 Mismatch repair
RvVAT039_17550
03440 Homologous recombination
RvVAT039_17550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avv03032
]
RvVAT039_17550
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_17550
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RvVAT039_17550
DNA replication proteins [BR:
avv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RvVAT039_17550
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RvVAT039_17550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_5
AAA_30
AAA_14
AAA_19
AAA_18
RuvB_N
AAA_assoc_2
TsaE
SRP54
AAA_24
SKI
DUF815
ResIII
Rad17
AAA_28
AAA_2
CbiA
nSTAND3
ABC_tran
VapE-like_dom
RNA_helicase
Thymidylate_kin
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
BCH64539
LinkDB
All DBs
Position
1:1925285..1927195
Genome browser
AA seq
636 aa
AA seq
DB search
MSDLEPTAQAAPASGQASGAYRVLARKYRPKDFTDLMVGQEPMVRTLTNAFETGRIAQAY
MLTGVRGVGKTTTARILARALNYKTTEIDRPTIDLKIPGEHCQAIMEGRHVDVIEMDAAS
HTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTAAFNGLLKTLEEPPEHVKFIFATT
EIRKVPITVLSRCQRFDLRRISAGDLVGLFSTILSKENIEAEDEALAMIARAAEGSARDG
LSLLDQAIAHGAGRVEADAVRSMLGLADRARVVDLFGHIVLGDVAAALSEFNSQYEAGAS
PSVVLTDLADFTHLVTRLKYVPNGANDPSLSEVERVRGADYAESVAVTTLSRIWQMLLKG
IPEVENASRQAGAAEMVLIRLAHAAHLPSPEEAARRLLDMAQDGGGAPQGTSPRGGNGGG
ASASYGGQAVARASSDPAPRALGQTQPTAHLQVVPKASPSPDIAARPETKPEIQPDVPEP
KVPEPKVPVRSLDDIVHLCTANRDPKLKALTRAYVRLVKLENGRLEINMPPEAPKSLVGD
LQKRLEEWTDIRWMVILSREPGEKTLAEQEKSDHEARMTDAAADPDVMAILSRFPGAKIT
DVRIRTVTEEEDEALPPPAAAESAEGDILPGDDIEF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctggaacccacagcacaagctgctcccgcgtccggccaagcctccggtgct
taccgcgttctggcgcgcaaatatcgccccaaggattttacggacctgatggtcggccag
gagccgatggttcgcacgctcaccaatgcctttgagacgggccggattgcccaggcctat
atgctgaccggcgtgcgcggggtcggaaagaccaccaccgcccgtattctcgctcgcgcg
ctgaactacaagaccactgagatcgaccgcccgaccatcgacctgaaaatccccggcgag
cattgtcaggcgatcatggaaggccgccatgtcgatgtgatcgagatggacgccgcctct
cataccggcatcgacgatatcagggaaatcatcgagcaggtgcgctaccgcccggtatcg
gcccgctacaaggtctatattatcgacgaagtgcatatgctctccaccgctgccttcaat
ggcttgttgaagacgctggaagagccgccggaacatgtgaagtttatcttcgccaccact
gaaatccgcaaagtgccgatcacggtgctgtcacgctgccagcgcttcgatctgcgccgc
atcagcgccggtgatctggtcgggttgttttccaccattctctccaaagaaaatatcgag
gcggaagacgaggcgctggcaatgatcgcccgtgccgccgaaggctcggcccgtgacgga
ctttccttgcttgatcaggccattgcccatggggcagggcgggtcgaagcagacgccgtg
cgctccatgctgggtctggccgaccgcgcccgggtggtcgatctgttcggccatatcgtg
ctcggcgatgtcgccgccgctctttcggaattcaacagccaatatgaagccggtgccagc
ccaagcgtggtgctgaccgatcttgccgatttcacccatctggtgacgcggctgaaatat
gtacccaatggtgccaatgacccgtcgctgagtgaagtcgagcgggtgcggggggcggac
tacgccgagagcgttgccgtcaccacgctgtcgcgcatctggcaaatgttgctcaagggc
attcccgaggtggaaaacgcttctcgtcaggccggtgccgccgaaatggtgctaatccgg
ctcgcccatgccgcccatctgccttcgccggaagaagcggcgcgccgcctgctggacatg
gcacaggatggcgggggtgccccgcaggggaccagtcccagaggcggtaatggcggtggc
gcatcggccagctatggcgggcaggcggtggcgcgggcgtcgagcgatccggccccacgt
gcattaggccagacccagccgaccgcgcatttgcaggtggttcccaaggcatcaccgtcg
cctgacattgccgcccgtccagagacaaaacctgagatccaaccggatgtgcccgagccc
aaggttcccgagcccaaggttcctgtgcggtcgctggatgacatcgtccatctctgtacc
gcaaaccgcgatccgaagctgaaagccttgacccgcgcctatgtacgactggtcaagctg
gaaaacggtcggttggagatcaacatgccgccggaggcgccgaaatcgctggttggcgat
ttgcaaaagcggctggaggaatggaccgatattcgctggatggtgatcctcagccgcgag
ccgggggaaaagaccctggccgagcaggaaaagagtgatcacgaagcgcggatgaccgat
gcagccgccgatccggatgtgatggcgatcctgtcgcgctttcccggcgcgaaaatcacc
gacgtgcgcatccgcaccgtcacggaggaagaggacgaggccctgccgccgccagcggcg
gctgaatccgcagagggtgatatccttcccggagacgacatcgagttttaa
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