Agrobacterium vitis VAT03-9: RvVAT039_17980
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Entry
RvVAT039_17980 CDS
T08809
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avv03021
]
RvVAT039_17980 (nusA)
03009 Ribosome biogenesis [BR:
avv03009
]
RvVAT039_17980 (nusA)
Transcription machinery [BR:
avv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RvVAT039_17980 (nusA)
Ribosome biogenesis [BR:
avv03009
]
Prokaryotic type
rRNA transcription factors
RvVAT039_17980 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_2
KH_NusA_C
KH_1
PGBA_C
Motif
Other DBs
NCBI-ProteinID:
BCH64582
LinkDB
All DBs
Position
1:1974360..1975976
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AA seq
538 aa
AA seq
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MAVSANRLELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGSETNIRADINSKTGE
IRLQRLLEVVETVEDYGTQIALELARDRNVDAKLGDYIADPLPPMDFGRIAAQSAKQVIV
QKVREAERDRQFDEFKDRVGEIINGTVKRVEYGNVIVDLGRGEGIIRRDEMIPRETMRYG
DRVRAYVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGVIQIKSVARDPGSRAKI
AVISNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSADPASFIVNALQPAEVAKV
VLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDIMTEAEESERRQKEFNERT
NLFMDALDVDEMVGQVLASEGFAQVEELAYVDLEEIASIDGFDGDTAEEIQTRAREYLEK
LEAELDAKRKALGVSDELRSIDGMTTQMLVALGGDGIKTVEDFAGCAADDLIGWSERKDG
ETKKFEGLFSKIDISRTEAEQMIVQARLAAGWITEADIAAEAEAEVVEDEAQEAEQGS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgctaatcggctcgagctgttgcagatcgcggatgcggtcgcacgcgaa
aaagtcatcgaccgcgaaatcgtgcttgctgcgatggctgacgccatccagaaggccgcg
cgttcgcgttacggttccgagaccaatattcgcgccgacatcaactccaagaccggcgag
attcgtctgcagcgcctgctcgaagtggtcgaaaccgtcgaggattacggcacccagatc
gcactcgaactggcgcgcgaccgcaatgttgacgccaagctcggtgattacattgccgat
ccgctgccgccgatggatttcggtcggatcgccgcccagtccgccaagcaggttatcgtg
cagaaagtgcgcgaagccgagcgtgatcggcagttcgatgagttcaaggatcgcgtcggc
gaaatcatcaacggcacggtcaagcgtgtcgaatatggcaatgtcattgtcgatctcggt
cgtggcgaaggcattatccgccgcgatgaaatgatcccgcgcgaaaccatgcgttacggt
gaccgcgttcgcgcctatgtctatgacgtgcgccgcgaacagcgtggcccgcagattttc
ctgtcgcgcacccatccgcagttcatggtgaaactgttcaccatggaagtgccggaaatt
tacgacggtgtcatccagatcaagtcggtggcccgtgacccgggttctcgcgccaagatc
gcagtgatttccaacgacagctcgatcgatccggtcggtgcctgcgtcggtatgcgtggt
tcgcgcgtccaggccgtggttggtgaattgcagggcgaaaagatcgatatcattccgtgg
tcggcagacccggcatccttcatcgtcaacgcgcttcaaccggcagaagttgccaaagtg
gtgcttgacgaagatgccgagcgcatcgaagtggttgttcccgatgagcagctgtcgctg
gccatcggccgtcgcggccagaatgtccgcctggcgtcgcagctgaccggctgggatatc
gacatcatgacggaagcggaggaatccgagcgccgccagaaggaattcaacgagcgcacc
aatctgttcatggacgcgctcgatgtggacgaaatggtcggccaggttctggcatcggaa
ggctttgcccaggttgaagagcttgcctatgtcgatctggaggaaatcgcttccatcgat
ggttttgacggcgataccgcagaagaaatccagacccgcgcccgcgagtatctcgaaaag
ctggaagccgaactggatgctaagcgcaaggcgctcggcgtgtccgacgagctgcgcagc
attgatggcatgacaacgcaaatgttggttgcgctcgggggagacggcatcaagacggtc
gaggatttcgccggctgcgctgctgacgacctgatcggctggagtgagcgtaaggatggc
gagaccaagaaattcgagggcctgttctcgaaaatcgacatttctcgcaccgaagcggaa
cagatgatcgttcaggctcgcctggcggctggctggatcaccgaagcggatattgccgcc
gaggctgaggcagaagtcgtcgaggatgaggcgcaagaggctgagcagggctcgtga
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