Agrobacterium vitis VAT03-9: RvVAT039_18280
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Entry
RvVAT039_18280 CDS
T08809
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAT039_18280 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avv01007
]
RvVAT039_18280 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_18280 (pheT)
Enzymes [BR:
avv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RvVAT039_18280 (pheT)
Amino acid related enzymes [BR:
avv01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RvVAT039_18280 (pheT)
Transfer RNA biogenesis [BR:
avv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAT039_18280 (pheT)
Prokaryotic type
RvVAT039_18280 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BCH64612
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All DBs
Position
1:2005034..2007457
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AA seq
807 aa
AA seq
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MKFTLSWLKDHLDTDATLDQVCERLTAIGLEVEDVDDKAAYKPFVIAKILAAEKHPSADR
LKVLSVDAGDGKPVQVVCGAPNARAGLIGAFGRPGMYVPGLDVTLAVGNIRGVESHGMMC
SEKELNMSDNHDGIIDLPEDAPIGTSFAAYAGIDDPMIEINLTPNRPDCTSIFGIARDLA
ASGLGTLKQPKAPSFAVEGETSLEVKLELDDAKLCPGFAYRLVRGVKNGPSPVWMQKRLI
AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGVLTVRRAKDGEEILALDTRTYKLTP
NTVVIADDNGVESIGGIMGGEHSGCDKNTSNVLIESALWDPINIAKSGRSLGIITDARYR
FERGVDPDYMVPGLERTTELVLEMCGGKAASAKVVGYQGHTKKVVDFPFSEVKRLTGLNV
STDESRTILTGLGFEVSGEGETVKVAVPSWRPDVDGKADLVEEVMRMHGVDKITPEPLPS
MGAVNTKILTTLQIRTRTAKRALASRGMMEAVTWSFISAEQAALFGGGKPELKLVNPIAA
DMSDMRPSLLPGLLTAAQRNADRGFGDVAIFEVSGTYEGDTPEGQRRVAGGVRRGTASLS
GAGRMWSNATKGGGKPVDVYDAKADALAVLEACGLPMGNVQIEQGGPEWYHPGRSGTIKM
GPKVVLGYFGEFHPKTLAALDVSGTLCGFEIYLDAMQEPKKKATRTKPALDLSPLQMVKR
DFAFVVEKQVEAGAIIKAATSADRKLITGVNVFDVFEGASVGEGKKSVAIEVLIQPSDKT
LTDEDFDALTKKIVGNVEKTTGGALRA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacactctcctggttgaaagaccatctggacaccgatgccacgctggatcag
gtctgcgagcgccttaccgccattggccttgaagttgaggatgttgatgacaaggcggcc
tataagccgtttgtgattgccaagatcctcgctgcggaaaagcatccgtctgcggatcgt
ctgaaagttttgtcggtcgacgccggtgacggtaagcctgtgcaagtcgtttgcggtgcg
ccgaatgcgcgggcgggcttgattggcgcgtttggccgtccgggcatgtatgtgccgggg
ctggatgtgacgctggcggttggcaatattcgcggcgtcgagagccacggcatgatgtgt
tctgaaaaagaactcaacatgtctgacaatcacgatggcattattgatctgccagaagat
gcgccgattggcacctctttcgccgcctatgctggcattgatgatccgatgatcgagatc
aatctcacgcccaatcggcccgattgcaccagcattttcggcattgcccgtgatctggcc
gcctccggccttggcacgttgaagcagccaaaggctccaagctttgcggtggaaggtgag
acctcgcttgaggtcaagctggagctggatgatgccaagctgtgccccggctttgcctat
cgcctcgtgcgcggtgttaaaaatggcccaagcccggtctggatgcaaaagcggctgatt
gccattggccttcgcccgatctcggcgctggtggatgtgaccaattacatgacctttgat
caaggtcggcccatgcatgtgtttgatgccgataaggtcaagggtgtgctgaccgtgcgc
cgcgccaaggatggcgaggaaattctcgcgctcgacacccgtacctataagctgacaccc
aacaccgtggtgattgccgatgacaatggagtggaatccattggcggtatcatgggcggc
gagcattccggctgcgataaaaacaccagtaatgtgctgattgaatcggccctgtgggac
ccgatcaacattgccaaatcgggccgttcgctcggcatcatcaccgatgcccgctatcgg
tttgagcgcggtgttgacccggactatatggtgcccggccttgagcgcaccaccgagctg
gtgctggagatgtgcggcggaaaggctgcaagcgccaaggtggttggctatcagggccac
acgaaaaaggtggttgatttcccattctcggaagtcaagcgcctcactggcctcaatgtt
tccaccgacgaatcccgcaccatcctcaccggtcttggctttgaagtgtcgggcgagggc
gaaaccgtcaaggtggctgtgccatcatggcggccagatgtggacggcaaggccgatctg
gtggaagaggtcatgcgtatgcatggcgtggataagattacgccagagcctctaccatcc
atgggcgcggtcaacaccaaaatcctcaccaccttgcagatccgcacccgcacagccaag
cgggcgctggccagccgtggcatgatggaagccgtgacgtggtcgttcatctcggcagaa
caggccgctttgtttggtggcggcaagccggagctgaaactggtcaacccgattgctgct
gacatgtcggacatgcgcccatcgctgctgccgggtctgctcaccgcggctcagcgcaat
gccgaccgtggctttggcgatgtggcgattttcgaagtctccggcacctatgaaggtgat
acgcccgaaggccagcgtcgcgtggctggcggcgtgcgtcgtggcacggcatcgctctca
ggtgctggtcgtatgtggtccaacgccaccaagggcggcggcaagccagtggatgtctat
gacgccaaggccgatgcgctggccgtgctggaagcctgcggcctgccgatgggcaatgtg
cagatcgagcagggtggtccggaatggtaccatccgggccgctccggcaccatcaagatg
ggtccaaaggtcgtgctcggctactttggtgagttccaccccaagacgctggccgcattg
gatgtttccggtacgctctgcggctttgagatctatctcgatgccatgcaggagccgaag
aagaaggccacccgcaccaagcctgcgctggatctctcgcccttgcagatggtgaagcgc
gatttcgcctttgtggtcgaaaaacaggttgaagcgggcgcgatcatcaaggctgccacc
agcgccgaccgcaagctgatcacgggcgtcaacgtgtttgacgtgtttgaaggggcaagc
gttggcgaaggcaaaaaatcggtggccattgaagtgcttatccaaccatcggacaagacc
ctgaccgatgaggattttgacgcgctgaccaagaagatcgtcggcaatgtggagaagacc
acaggcggtgcgctacgcgcctga
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