Agrobacterium vitis VAT03-9: RvVAT039_19060
Help
Entry
RvVAT039_19060 CDS
T08809
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RvVAT039_19060 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_19060 (recF)
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RvVAT039_19060 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_29
AAA_15
ABC_tran
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCH64690
LinkDB
All DBs
Position
1:2085954..2087078
Genome browser
AA seq
374 aa
AA seq
DB search
MAEKTFINRLQLTDFRNYGSASLRLDGRHVVLTGNNGSGKTNLMEAVSFLSPGRGLRRAV
LSDVARAGAAGGFSIFAGLEGMAGDVELGTGSEVQDEAAVRRLRINGASVRSVDELTDHL
RVLWLTPAMDGLFTGSSSERRRFLDRLVLSIDPQHGRRASDFERAMRSRNKLLSEGRFDA
SWLAGIEQQMAALGIAMALARQEMMRLLATLIEQRREPETFPGADLMLSGFMDEHAGTAA
IDLEDTYRDSLAGSRGRDAAAGRTLEGPHRSDLLVRHREKDMEAERCSTGEQKALLIGLI
LAHAELVATMTGFAPILLLDEIAAHLDEGRRAALFDRIDVLGGQAFMTGTDAQMFASLGD
RAQFVTVDDGHLSL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaaccttcatcaaccggctgcagctgacagatttccgcaattacggctcc
gcctccttgcggctcgatggccgccatgtggtgctgaccggcaataatggttccggcaag
accaatttgatggaagcggtgtcctttctgtcgccggggcgcgggctgcgtcgggcggtg
ctgtctgatgtggcgcgggccggtgcggcaggtggattttcgatttttgccggcctggag
ggcatggctggcgacgtcgaacttggcaccggctccgaggttcaggacgaggcggcggtg
cggcgtctgcgcatcaatggcgcctcggtgcgctccgtcgatgaattgaccgatcatctg
cgcgttctctggctgacgcccgccatggacgggctcttcaccggctcctcttccgagcgg
cgccggtttctggatcggctggtcctgtcgattgacccgcagcatggtcgtcgcgccagc
gacttcgagcgcgccatgcgcagccgcaacaaactgctctctgaaggtcgtttcgacgcc
agctggcttgccgggatagagcagcagatggcagcactcggcattgccatggcgctcgcc
cggcaggaaatgatgcggttgctggccactcttatcgagcagagacgggagcctgaaacg
tttccgggggcagacctgatgctgtcgggctttatggatgagcatgctggcacggcggct
atcgatctcgaagacacctatcgcgacagtctggcaggctccaggggcagagatgcagcg
gcaggccgcacgctggaggggccgcatcgcagcgatcttctggtccgtcaccgggaaaag
gacatggaagccgagcgctgttcgaccggcgagcagaaggctctgctgatcggcctgatc
cttgcccatgccgaactggtggcgacgatgaccggctttgcgccgatcctgcttttggat
gaaattgccgcccatctcgacgaaggccgccgcgctgccctgttcgaccggatcgacgtg
cttggcggccaggccttcatgaccggtaccgatgcgcagatgtttgcaagtctgggcgat
cgggcacaattcgtcacagtggatgacggccatctgtcattgtga
DBGET
integrated database retrieval system
