Agrobacterium vitis VAT03-9: RvVAT039_19150
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Entry
RvVAT039_19150 CDS
T08809
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_19150
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RvVAT039_19150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BCH64699
UniProt:
A0AAN1WZF1
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All DBs
Position
1:2097465..2098349
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AA seq
294 aa
AA seq
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MRDLNFNHLRYFWAVAHEGSLTRAAQHMNLSQSALSVQIQKLEHQMGHALFERVGKKLVL
TEAGQIALDYADTVFKAGDELMSTLSGRPTASRQVLRVGALTTLSRNFQLEFLRPLVGRS
DVELIMRSGNMRDLLAQLEAHAVDVVLANSAAPRDARSLLRNHLLNEQPVSLVGRPRPDG
QSFKFPDDLRTEPLLLPSLDSDIRVAFDRILEMAGIRPIILAEVDDMAMLRLLAREREGL
TLVPPIVVRDELEAGVLIEHCRIPEVIESFYAIIQKRRFPNTMLAELLASGRVL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagagatctaaattttaatcatctccgctatttctgggcggtcgcgcatgaaggcagc
ctgacacgggccgctcaacacatgaacctgtcgcaatcggcgctttcggttcagatccag
aagctcgaacatcagatgggtcatgcgctgtttgagcgcgtcggcaagaagctcgtgctg
acagaggccggacagatcgcgctggattatgccgatacggtgttcaaggccggtgacgaa
ttgatgagcacgctcagtggccgcccgaccgccagccgccaagtgctgcgggtcggggcg
ctgacgactctgtcgcgcaactttcagctggaattcctgcgcccgctggtcggtcgctcc
gacgtggaactgatcatgcgttccggcaatatgcgcgatctcctggcgcaactcgaagcc
catgccgtcgatgtggtgctggcaaacagcgccgccccgcgtgatgcacgctcactgctg
cgcaatcatctgctgaacgagcagccggtcagcctggttggacgcccccggcctgatggg
cagagttttaaatttcccgacgacctgcgcaccgagccgttgctactgcccagcctcgac
agcgatatccgcgtggcctttgaccggattctcgaaatggctggcatcagacccatcatt
ctcgccgaggtcgatgatatggcgatgcttcgccttctggcacgtgagcgcgaagggctc
acgctggtgccgccgatcgtcgtgcgcgacgaactggaggcgggagtgctcatcgaacac
tgccgcattcctgaagtcatcgaaagcttttatgcaatcattcagaaacgacgctttccc
aatacgatgctggccgaactgctggccagcggtagggtgttatga
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