Agrobacterium vitis VAT03-9: RvVAT039_19400
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Entry
RvVAT039_19400 CDS
T08809
Symbol
rsmI
Name
(GenBank) ribosomal RNA small subunit methyltransferase I
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avv03009
]
RvVAT039_19400 (rsmI)
Enzymes [BR:
avv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RvVAT039_19400 (rsmI)
Ribosome biogenesis [BR:
avv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RvVAT039_19400 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF4350
Motif
Other DBs
NCBI-ProteinID:
BCH64724
LinkDB
All DBs
Position
1:2122248..2123231
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AA seq
327 aa
AA seq
DB search
MHAMCLCGQVREGLSEYRENGMSAVAETVNTPDDGQKSFRLHDRPVTARPIEPALYLVAT
PIGNLSDITLRALEVLAGADVLACEDTRVTRVLLDRYGITTRPYAYHEYNAEEVGPKLIE
ALASGKSVALVSDAGTPLVSDPGYRLAKLAIEAGLRVVPLPGPSAPLAALVGSGLPNDAF
LFAGFLPTKDKARRDRLAQWAATPATLIFFESPHRIGATLAAAAEVLGAERSACVCRELT
KTFEEFRRGTLAELSDWYDDERQVKGEIVLVVGPPLPSGPPDAADVDRLLVQLAQTLPTA
GAATEAARQTGLPRKDLYQRLLELKAG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccatgtgcctgtgtggacaggtccgggaagggctgtccgaatacagagagaat
gggatgagtgccgtggcagagactgtgaacacgccggatgacgggcagaaaagcttccgg
ctgcatgatcgcccggtcacggcccggccaatcgagccagcgctctatctggtggctacc
ccgatcggcaatctctccgacatcactttgcgggctctggaagtgctggccggagccgat
gttctggcctgcgaagatacccgcgtcacccgtgtgcttctggatcgctatggcatcacc
acccgtccctacgcctatcacgaatataatgccgaggaggtcgggccgaagctgatcgag
gcgctggcctctggcaaatccgtggcgctggtttccgatgcggggacgccgctggtgtcc
gatccggggtatcggctggcgaagcttgccattgaggcggggctgcgggtcgtgccattg
ccggggccgtcggcaccgcttgccgccctggtcggctccggcctgcccaatgatgccttc
ctgtttgcgggcttcctgcccaccaaggacaaggcccgccgcgacaggctggcgcaatgg
gcggcaacaccggcaacgctgatcttctttgaatcgccgcatcggatcggtgcgaccctt
gcggcagcagccgaggtgttgggcgcggagcgcagcgcctgcgtctgccgtgaactgacc
aagacattcgaggaatttcggcgcggcactctggcagaattatccgactggtatgatgac
gagcgccaggtcaagggtgaaatcgtgctggtggtcgggccgccgctgccctccgggccc
ccggatgccgccgatgtggaccggttgctggtacagctcgcgcaaaccctgccgacggcg
ggggcggctactgaggccgcccgccagaccggcctgccgcgcaaggatctttatcaacgc
ctgctggagttgaaggccgggtga
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