Agrobacterium vitis VAT03-9: RvVAT039_20260
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Entry
RvVAT039_20260 CDS
T08809
Symbol
yidC
Name
(GenBank) membrane protein insertase YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
avv03060
Protein export
avv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RvVAT039_20260 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RvVAT039_20260 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_20260 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
avv03029
]
RvVAT039_20260 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avv02044
]
RvVAT039_20260 (yidC)
Mitochondrial biogenesis [BR:
avv03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RvVAT039_20260 (yidC)
Secretion system [BR:
avv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RvVAT039_20260 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
ArlX
Motif
Other DBs
NCBI-ProteinID:
BCH64810
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All DBs
Position
1:2208644..2210503
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AA seq
619 aa
AA seq
DB search
MENNRNYLIAIALSVMVVLGWQFFYMNPRIEAQRQAEQAQQAQQAKTPATQATPGAAVNG
ALPGQTQASATTSREDAVAKSARVEINTEALSGSINLTGARLDDLRLKGYHETVDKTSPI
ITLLNPADTKDGYFAEIGFIGGEKSGSVPGPSTVWTVKDGQTLTETTPVTLTYTNDAGLT
FSRKISVDKHYMFTIEDTVANAGGADISLAPYGRVTRYNKPAVASTYVLHEGFIGVMGSG
DGKFASVEAKYAAIEKENETNAKATGGWLGITDKYWAATLVPPQSLAYDSRFSHFTDGQA
RFQADYKNDPVTIAPGQSTTLKTLLFAGAKEVPVVDGYALDKSWFGQAFTNLFAGAKDTV
QQYDIPRFDLLIDWGWFYFLTKPMFKLMDFFFRQVGNFGVAILLTTIAVKLLFFPLASKQ
YASMANMKRMQPKMEELKAKHGDDRMALQQAMMELYKTEKINPVAGCWPLLLQIPVFFSL
YKVIYITIEMRHAPFFGWIRDLSAPDPTSIVNLFGLLPFESPAMLHLGIWPIIMGITMFV
QMRMNPTPPDPTQAMLFNWMPLVFTFMLGSFPAGLVIYWAWNNTLSVLQQSIIMKRHGVK
IELFDNLKGLLRRKSAKTK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaccgcaattatctcatcgcgattgcactgtcggtgatggtcgtcctgggc
tggcagttcttctacatgaacccgcggatcgaggcgcaaagacaggctgaacaggcccag
caggcccaacaggcaaagaccccggccactcaggcaacgccgggtgctgccgtcaatggc
gcgctgccgggtcagacccaggccagcgccacgacaagccgcgaagacgctgtcgccaag
tcggctcgggttgaaatcaataccgaagcgctgtccggctccatcaatctcacgggtgca
cggctcgacgatcttcgcctgaagggctatcacgagaccgtcgacaagacgagcccgatc
attaccctgctcaatccggccgataccaaggacggttatttcgccgaaatcggctttatc
ggcggcgagaaatccggcagcgttccaggaccatcgacggtctggacggtcaaggatggc
cagacgctgaccgaaaccacaccggtgacgctgacctataccaatgacgcgggcctgacc
ttcagccggaagatctcggtcgacaagcattatatgttcacgatcgaagacacggttgcc
aatgccgggggcgctgacatcagccttgccccctatggccgtgttacccgctacaacaag
cctgccgttgcctccacctatgtgctgcatgaaggctttatcggcgtgatgggttcgggc
gatggtaagtttgcctcggtcgaagcaaaatatgcggctatcgaaaaagaaaacgagacc
aatgccaaggcaaccggtggctggctcgggattaccgataaatattgggccgcgaccctc
gtgccgcctcagtcgctggcctatgattcccgcttctcgcattttaccgatggccaggct
cgcttccaggcggattacaagaacgatccggtgacgattgcaccgggccaatcgaccacg
ctgaagacgctgctgtttgctggcgccaaggaagttcctgttgttgatggctatgcgctc
gacaagtcctggttcggacaggcgtttaccaatctgtttgccggtgccaaagacacggta
caacaatatgacattccacgtttcgatcttctgatcgattggggctggttctatttcctc
accaagccgatgttcaaactgatggacttcttcttccgtcaggttggcaattttggcgtg
gctatcctgctgaccacaattgccgtcaaactgttgttcttcccgctggccagcaagcaa
tatgcgtccatggccaatatgaagcgcatgcagccgaagatggaagagttgaaggccaag
cacggcgatgaccgcatggccctgcaacaggcgatgatggagctctacaagaccgagaag
atcaatccggtcgctggctgctggccgctgctgttgcagatcccggtattcttctcgctc
tataaggtgatctatatcaccatcgaaatgcgccatgcgccgttctttggctggatcaga
gacctttcggcacccgatccgaccagcattgttaacttgtttggcctgctgccgttcgag
tcgcccgccatgctgcatcttggtatctggccgatcatcatgggcatcaccatgttcgtg
cagatgcgtatgaacccgacgccgccagacccgacccaggccatgctgttcaactggatg
ccgctggtcttcaccttcatgctcgggtctttcccggccggtctggtgatctactgggcg
tggaacaatacgctgtcggtgttgcagcagtcgatcatcatgaagcgccatggggtgaag
atcgaactattcgacaatctcaaggggcttttgcggcgaaaatccgctaagaccaaataa
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