Agrobacterium vitis VAT03-9: RvVAT039_20660
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Entry
RvVAT039_20660 CDS
T08809
Name
(GenBank) C4-dicarboxylate ABC transporter permease
KO
K11690
TRAP-type transport system large permease protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_20660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_20660
Transporters [BR:
avv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RvVAT039_20660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
BCH64850
LinkDB
All DBs
Position
1:complement(2251395..2252681)
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AA seq
428 aa
AA seq
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MTVAVLILSFSFLLLIGVPIAWCMGVASLLTIYVGHLGLPFAWFAQQTIRGADAITLAAI
PLFLFAGELMNRGGLTARIMRVAEHVFGRITGGLGLVNVATALVYGGISGSATADTGAVG
SIMIPAMAERGYPKAFAAAVTAASGTLGIIGPQSVILILYGVLTNTSIGGLLVAALLPGL
FIAVTFMVTSYIVAKRHNFPRNETPAQWGEIGRDALGALPALLMPVLVLGSIIGGIATAT
EASALAVVYSFLIGIFVYRELPLRSLYSAASAAVATTGVIMMIMALATPFGWILTVEQVP
ANAAAWITGLHTTPLVTIILVLVLLKVVGFWLDLGPALIILAPILVPIALAAGMTPYQTG
IVFTMTLGIGLFTPPIGTNIFVVCNVAKIDMWSVSKWLVPYWIASVVCVAALVAFPILTE
WLPSLFGV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgccgtccttatcctcagcttttcctttctgctgctgatcggcgttcccatt
gcatggtgcatgggcgtggccagcctgctgacaatctatgtcggccatctcggcttgccc
ttcgcctggtttgcacagcagacgatccgcggtgccgatgccattaccctggcggccatt
cctctgtttctctttgccggagaattgatgaaccgtggcggcctgacggccaggatcatg
cgggtcgcggaacatgttttcggtcgcatcaccggcggccttggcctcgtcaatgttgca
acggccctcgtctatggtggcatcagtggttcggcgaccgccgataccggcgctgtcgga
tcgatcatgatccccgccatggccgagcgaggctatccgaaagcctttgccgccgccgtc
accgccgcgtcgggcaccctcggcattattggtccgcagagcgtcattctgatcctctat
ggcgtgctgacgaacacctcgatcggcggcctgctggtggcagccctgctgccaggcctg
ttcatcgcggtgacattcatggtcacatcctacatcgtcgctaaacgccataactttccg
cgcaacgaaacacccgcgcaatggggtgaaattggcagggatgcgcttggcgcccttcct
gccctgctgatgcccgtgctggtgctgggctcgatcatcggcggcatcgccacggctaca
gaagcctcggcgctcgccgttgtctattcattcctgatcggaatcttcgtctatcgtgag
cttccgctgcgttcgctctattcggcggcgtcggctgccgtggcaacgacaggcgtaatc
atgatgatcatggcactcgcgacaccgttcggatggattctgacggtcgaacaggtgcca
gccaatgccgccgcctggattaccgggctgcatacgacaccgctcgtcaccatcatcctc
gtgctggtgttgttgaaagtcgttggcttctggctcgatcttgggccagcgctgatcatt
ctggcgccgatactggttcctatcgccctggcagcgggcatgacgccttatcagaccggc
atcgtcttcaccatgacgctcggcatcggcctatttaccccgccgatcggcacgaacatc
tttgtcgtctgcaatgtcgcgaaaatcgacatgtggtcggtctcgaagtggctggttccc
tattggattgccagcgtggtttgtgttgcggcgcttgtcgctttccccatcctgaccgaa
tggcttccaagcctgtttggagtttaa
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