Agrobacterium vitis VAT03-9: RvVAT039_20920
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Entry
RvVAT039_20920 CDS
T08809
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_20920 (truA)
Enzymes [BR:
avv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RvVAT039_20920 (truA)
Transfer RNA biogenesis [BR:
avv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RvVAT039_20920 (truA)
Prokaryotic type
RvVAT039_20920 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BCH64876
LinkDB
All DBs
Position
1:complement(2280740..2281519)
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AA seq
259 aa
AA seq
DB search
MPRYKLTVEYDGTPYVGWQRQDNGPSVQGALEAAVLGLTGETVAIRGAGRTDSGVHASGQ
VAHVDLLRQWLPYKLRNALNAHLAQAGQAISILAAEAVPDAFDARFSALKRHYLYRIISR
PSRLALEANRAWWVSKPLDHEAMHAAAQMLVGNHDFTTFRSVHCQAISPVRTLDRLDVSR
NGDLIEIRASAQSFLHNQIRSFAGTLKMAGEGKMTPEDVRAALEARDRKACGPVAPPQGL
YFLQVDYPADGNWRPYSKT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctacaagctgaccgtggaatatgacggcacaccctatgttggctggcagcgg
caggacaatggtccctccgtgcagggcgcgctcgaagcggcagtgcttggcctgacgggg
gaaacggtggcgatccggggtgcgggccgcaccgattccggcgtccatgccagcggccag
gtggcgcatgtcgatcttttgcgtcaatggttgccctacaagctgcgcaatgcgctgaac
gcgcatctggcgcaggctgggcaagcaatttctattctggctgccgaagccgttcccgac
gccttcgatgcgcggttttcagccctgaagcggcattatctctaccggatcatatcacgc
ccgtcccggctggcgctggaggccaatcgcgcctggtgggtatcgaaaccgctggaccac
gaggccatgcatgccgcagcccaaatgctggtcggcaatcacgattttaccaccttccgc
tcggttcattgtcaggccatcagcccggtgcgcacgctggaccggctggatgtcagccgc
aacggcgatctcatcgagatccgcgcctccgcccagagttttctgcacaaccagattaga
tcttttgctggcaccttgaaaatggcgggagaaggcaagatgacgccggaggatgttcgc
gccgccctggaggcccgcgaccgcaaggcctgcggcccggtggcaccgccgcagggcctg
tattttttgcaggtagactatccggccgatggcaattggcgaccctattcgaaaacctga
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