Agrobacterium vitis VAT03-9: RvVAT039_21150
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Entry
RvVAT039_21150 CDS
T08809
Symbol
fadB
Name
(GenBank) enoyl-CoA hydratase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00071
Fatty acid degradation
avv00280
Valine, leucine and isoleucine degradation
avv00310
Lysine degradation
avv00362
Benzoate degradation
avv00380
Tryptophan metabolism
avv00410
beta-Alanine metabolism
avv00640
Propanoate metabolism
avv00650
Butanoate metabolism
avv00907
Pinene, camphor and geraniol degradation
avv00930
Caprolactam degradation
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
avv01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RvVAT039_21150 (fadB)
00650 Butanoate metabolism
RvVAT039_21150 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RvVAT039_21150 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RvVAT039_21150 (fadB)
00310 Lysine degradation
RvVAT039_21150 (fadB)
00380 Tryptophan metabolism
RvVAT039_21150 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RvVAT039_21150 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RvVAT039_21150 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAT039_21150 (fadB)
00930 Caprolactam degradation
RvVAT039_21150 (fadB)
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RvVAT039_21150 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RvVAT039_21150 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RvVAT039_21150 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
NAD_binding_8
2-Hacid_dh_C
FAD_binding_3
F420_oxidored
ApbA
GIDA
NAD_Gly3P_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BCH64899
UniProt:
A0AAN2BU28
LinkDB
All DBs
Position
1:complement(2302617..2304830)
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AA seq
737 aa
AA seq
DB search
MTYKNFTVETDADGIALVTWDMPDKSMNVFTMEVMDEIEAIVDATVADAAVKGVVFTSGK
SAFSGGADLSMIRGMFSMVEEERATDPANAVQKLFDSAGRMSWLWRKIETNGKPWVSAIN
GTCMGGAFELSLSCHGRVVSNGKSVKLALPEVKVGIFPGAGGTQRVPRLANAQDALQMMT
TGQTLTPQRAKAMNLVHQVVEPDQLITAAKQMIKDGLKPVAPWDEKGFKAPGGGIWTPAS
AQLWPAAPAVLRRETSGNYPAALAILKCVYEGLQVPFDTGLRIEQRYFTEIVQTTEAFSM
IRSLFISLQELGKGARRPAGQPKSTIKKVGVVGAGFMGASIAYVTAAAGLPVVLIDRDME
AANKGRSVAEGLVAGAIGKGKMSKEDGEKLLSLITPSDDYTSLSDADLVIEAVFEDRDVK
KAVIEKVEAVLPEGAIFASNTSTLPITGLAKNSKRPADFIGVHFFSPVEKMMLTEVILGK
ETGDKALAVALDYVAAIKKTPIVVNDTRGFFVNRCVLRYMAESYDMLLEGVPPVMIENAA
KFAGMPVGPLSLNDEVAIDLSYKILKATIADLGEKAVDPRHMELVARMVEKEERFGRKNG
KGFYDYPAKPAKKHVWPGLKDFYPQKKPDDVNVKTLQERFLATIALEAARTMEEGIVVDP
READVGSILGFGFAPYTGGALSYIDGMGVKTFVALCERLAKDHGPHFAPTPLLKEMAQKG
ETFYGRFDPYGAAKQAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacctataagaatttcaccgttgagaccgatgcagacggcattgcccttgtcacctgg
gacatgcccgacaaaagcatgaatgtcttcaccatggaggtgatggacgaaatcgaagcg
attgtggatgccaccgtcgcggatgcagccgtcaagggcgtcgtcttcacgtcaggcaaa
tccgccttttccggcggtgccgatctcagcatgatccgcggcatgttttccatggtggag
gaagaacgcgccacggacccggccaatgccgtgcaaaaactgttcgactccgctggccgc
atgagctggctgtggcgcaagatcgagaccaatggcaagccctgggtatcggccatcaac
ggcacctgcatgggcggcgcgtttgagctgtcgctctcctgccatggccgcgtggtctcc
aacggcaaatcggtgaagctggcgctgccggaagtcaaggttggcattttccctggcgcg
ggtggcacgcagcgtgtgccgcgtctggccaatgcccaggacgccctgcaaatgatgacc
accggccagaccctgacgccgcagcgcgccaaggccatgaacctcgtgcatcaggtggtg
gaaccggatcagctcattacagctgccaagcagatgatcaaggatggcttgaagccagtt
gcgccttgggatgaaaagggcttcaaggctcccggcggcggcatctggacaccggcatcg
gcccagctttggcctgcggcaccggctgtgctgcgccgtgaaacctccggcaattacccg
gccgccctggcgatcctgaaatgcgtctatgaaggcttgcaggtgccgttcgacaccggc
cttcgcattgagcagcgctatttcaccgaaatcgtccagaccaccgaagccttctcgatg
atccgctcgttgttcatctcgcttcaggagcttggcaagggcgcgcgccgcccggcaggc
cagccgaaaagcaccatcaagaaggttggcgtggttggtgctggtttcatgggcgcatcg
attgcctatgtcactgccgccgccggtctgcccgtggtgctgatcgaccgcgacatggag
gctgccaacaagggcagatccgtggccgaaggcctggtggcgggtgcgatcggcaagggc
aagatgagcaaggaagatggcgaaaagctgctgtctctgatcacccccagcgacgactat
acctcgctgtcggacgccgatctggtgatcgaagcggtgtttgaagaccgcgacgtcaag
aaggccgtgatcgaaaaggttgaggccgtgctgccggaaggggcaatttttgcctccaac
acctcgaccctgccaatcacgggtcttgccaagaactccaaacgtcctgctgatttcatc
ggcgtgcatttcttctcgccggtcgagaaaatgatgctgacggaagtcatcctcggcaag
gagaccggcgacaaggcgctggcggtggccctcgactatgttgcagccatcaagaagacg
ccgattgtcgtcaatgacacccgtggtttcttcgtcaatcgctgcgtgctgcgctacatg
gcggaaagctacgacatgctgctggaaggcgtgccgccggtgatgatcgagaatgccgcg
aaattcgccggcatgccggttgggccgctgtccctcaacgatgaagtggcaatcgatctg
tcctacaagatccttaaggcgaccattgccgatctcggtgaaaaggccgtggacccgcgc
catatggaactggtggcccgcatggtcgagaaggaagaacgctttggccgcaagaatggc
aagggcttttacgactaccccgccaagcctgccaaaaagcatgtctggccgggcctgaag
gacttttatccgcaaaagaagccggatgacgtcaacgtcaagaccctgcaagagcgtttc
ctggcgaccatcgccctggaagcggcccgcaccatggaagaaggcatcgtggttgatccc
cgcgaagccgatgttggctccatcctcggcttcggctttgccccctatactggcggtgcg
ctgtcctacatcgacggcatgggcgtgaagacattcgtggcgctctgcgaacggctggcc
aaggaccacggcccgcattttgcaccaacgccgctgctcaaggagatggcgcagaagggc
gagaccttctacgggcggtttgatccctatggggcagccaagcaggcggcctga
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