Agrobacterium vitis VAT03-9: RvVAT039_21390
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Entry
RvVAT039_21390 CDS
T08809
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00541
Biosynthesis of various nucleotide sugars
avv01100
Metabolic pathways
avv01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RvVAT039_21390 (rfbG)
Enzymes [BR:
avv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
RvVAT039_21390 (rfbG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
BCH64923
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All DBs
Position
1:2337535..2338635
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AA seq
366 aa
AA seq
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MEELVMMIDRQFWAGKRVLLTGHTGFKGSWLALWLTQMGAQVSGLALAPQTTPNLCGLLT
GHDNHAEGGICDLRDRIAVAALVARVKPQIVFHLAAQPLVRLGYRDPVATYETNVQGTVH
VLEALRISPDVKSIVVITTDKVYENAETGKAFVETDPLGGHDPYSASKAAAEIVVSSYRS
SFFAARGVGLATARAGNVIGGGDWAEDRLIPDAVRAWSLGVPLDVRRPNAVRPWQHVLEP
LAGYIAMAHHLWHDPASLTALNFGPDHASAACVADVLALAVRHFGSGEVVLGDGSDGPHE
AGYLMLDSSKACMTLGYRPLWSLEETVARTMNWYRRLAAGGSAKDLCLADIADYAHGLGM
DARQAG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctggtgatgatgattgaccgacagttctgggccggaaaacgggtgctgctg
accggccatactggcttcaagggcagttggctggcgctttggctgacgcaaatgggcgcc
caggtcagcggtctggcgcttgcgccacagactacacccaacctgtgcggcctgttgacc
ggtcatgataatcacgccgagggcggcatttgcgatctgcgtgaccgtattgcggtggcg
gccctcgttgcccgggtaaagccacagatcgtctttcatctggccgcccagccgctggtg
cggcttggctaccgtgatcccgtggcgacctatgaaaccaatgtgcaaggcacggtgcat
gtgctggaagcgcttcggatttccccggatgtgaagtccatcgtcgtcatcaccaccgac
aaggtctatgagaatgccgagaccggcaaggcctttgtcgagaccgatccgctcggcggt
catgatccctatagcgccagcaaggcggcggcagagatcgtcgtctccagctaccggtcg
tcgttttttgccgcacgcggcgtcggtcttgccacggcgcgggccggcaatgtcatcggc
ggtggcgattgggctgaggaccggttgatcccggatgcggtgcgcgcctggagcctcggt
gtgccgcttgacgtgcgccgcccgaatgcggtccgcccctggcagcatgttctggagccc
ttggcaggttacatcgccatggcgcaccatctgtggcatgatccggcttcgctgacagcg
ttaaattttggtcctgaccacgccagtgcggcctgcgttgcggatgttctggctctggcc
gtcaggcatttcggcagcggtgaggtggtgctgggcgatggcagcgatggtcctcatgaa
gccggttatctgatgctcgacagctccaaagcttgcatgacactcggctacaggccgctc
tggtcgctggaggaaaccgtggcgcgcaccatgaactggtatcgacggctcgccgctggt
ggatcggcaaaggacctgtgccttgccgatatcgccgattatgcccatggtctcggcatg
gatgcgaggcaggcgggatga
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