KEGG   Agrobacterium vitis VAT03-9: RvVAT039_21400
Entry
RvVAT039_21400    CDS       T08809                                 
Symbol
rfbC-2
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv00521  Streptomycin biosynthesis
avv00523  Polyketide sugar unit biosynthesis
avv00541  Biosynthesis of various nucleotide sugars
avv01100  Metabolic pathways
avv01110  Biosynthesis of secondary metabolites
avv01250  Biosynthesis of nucleotide sugars
Module
avv_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:avv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    RvVAT039_21400 (rfbC-2)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RvVAT039_21400 (rfbC-2)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RvVAT039_21400 (rfbC-2)
Enzymes [BR:avv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     RvVAT039_21400 (rfbC-2)
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: BCH64924
LinkDB
Position
1:2338632..2339195
AA seq 187 aa
MSQRFQPEDTAIPGLTLLTRSRFGDERGFLSRLFCGEELAAFGWPGPVLQVNETGTAQKG
TVRGLHFQHAPFAEWKLVTCVEGTILDVAVDLRQGAPSFLQHVCVELSGDNCRSLLIPPG
FAHGFQALSDTVRMIYTHSAPYRAEAEGGLHPQDARIGIAWPLPVERLSVRDQSHPLIQA
DFEGLIA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagccaacgtttccagcccgaagacaccgcgattcccggtctgacgctgctgacccgc
agccggtttggcgacgagcgtggttttctcagccggttgttttgcggtgaagagcttgcg
gcttttggctggccggggccggtcttgcaggtcaatgaaaccggcacggcacaaaaaggc
actgtgcgtggcctgcattttcaacatgcgccttttgccgagtggaaactggtgacctgc
gtcgaaggcacaatcctcgacgtggccgtggatctgcgccagggcgcgccgagctttctc
cagcatgtctgcgtcgaactgtcgggcgacaattgccgctcgctgctgatcccgccgggc
tttgcccatggctttcaggcactgagcgacaccgtgcggatgatctatacccattccgcg
ccttaccgggcggaggccgagggcgggcttcacccgcaggatgcaaggatcggcattgcc
tggcctttgccggttgagcggctgtcagtccgagaccagagccatccgctgatccaggcc
gattttgaaggactgattgcatga

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