Agrobacterium vitis VAT03-9: RvVAT039_21620
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Entry
RvVAT039_21620 CDS
T08809
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_21620
Transporters [BR:
avv02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAT039_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCH64946
LinkDB
All DBs
Position
1:2360675..2362831
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AA seq
718 aa
AA seq
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MRDNGKSRGRMIATLLLASVALPAKAEDVSGQVGDTAGTTVLQTITVTGKKSTRGYQPLS
TSAATRTDTPLLDVPQAVNVVSGEALKDQGARSLDDALANISGITQANTLGGTQDAVIRR
GFGDNRDGSILTDGMKTALPFSFNATTDRVEVLKGPASTLYGILDPGGMVNVVTKKPEDV
FSGEVYSSVTGYGAGKYGSTSGLDVTGPISGTDFSYRFIAEGENSDYWRNFGETKKWMVA
PSLSWSGEDTEVTVSYMHEDYSVPFDRGTIFDLNTGHAVDLSRRTRLDETYNITDGTSDL
AKLSIDRQLSDDWKLSLNYAYSRNEYSDNQARVTGYNSTTGAVTRRADATQYSTSYNHAV
RADLTGEVEIGGLQNDLLFGVSYDYSDTLRTDMLRCANSSNFNINNPVYGNLAQCNTVSA
SDSDQTEQLSTASVYMQDSLHLTEQWILVGGLRYQYYDLYAGKGRPFNANTDSNGDALIP
NGGIVYKLTPQISLYANAARTFRPQSSISSYYGNLDPEEGTSYEIGSKFELMEGLSANVA
LFSARKKNVAYSETIGGESVVKTAGLVRSQGLEVDVAGQLTDRWQAIASYGYTDAKVLED
PDYAGKQLPNVARHTGSLSVAYDVGDIGGDGNSLKVGGGIRAVGKRAGINSNSYFLPGYA
VVDLFAAYTFNFERPLTLQVNLKNIFDKTYYTSSIGSTNYANQVGEPFNVTVRASVKF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacaacggcaaaagccgtggtcggatgatagcgacgctcctgctggcatccgtc
gctttgccagccaaggccgaagatgtctccggtcaggtcggggatacggctggcacgaca
gtgcttcagaccattacagtgacgggcaaaaaatcgacgcgcggttatcagccgctctcc
accagcgccgcaacccgaacggatacgccgctgctggatgtgccgcaggcggtcaatgtg
gtgagcggtgaggcactgaaggaccagggcgcccgctctctggacgatgcgcttgccaat
atcagcggcattacccaggccaatacattgggcggcacgcaggatgccgtcattcgccgt
ggcttcggcgacaatcgggacggctcgatcctgaccgatgggatgaaaaccgcgctgcca
ttttccttcaacgccacgacggaccgggtcgaggtgctgaaaggcccggcttcgacgctt
tacggcattctcgatcccggcggcatggtcaatgtcgtcaccaagaagccggaggacgtg
ttttccggcgaagtctatagcagtgtaaccggttatggcgcgggcaaatatggctcgacc
tccggcctggacgtgaccggtccaatttccggcaccgacttttcctatcgttttatcgcg
gaaggtgaaaacagcgattactggcgcaatttcggtgagaccaagaaatggatggttgca
ccatccttgagttggagtggcgaggatactgaggttaccgtctcctatatgcatgaggat
tacagcgtgcccttcgaccgcggcacgattttcgatctgaacaccggccatgcggtggat
ctcagtcgccgcacccggctggatgagacatataacattaccgatggcacatcagatctg
gctaagctgtcaattgaccgacagttgagtgacgactggaaactgtccctgaactacgcc
tatagccgcaacgaatattccgataatcaggcccgcgtcaccggctataattccacaacc
ggtgccgtgacgcgccgcgccgatgccacgcaatattccaccagctacaatcatgcagtt
agggccgacctgaccggcgaagtcgagatcggcggcttacagaacgacttgttgtttggc
gtttcctacgattacagcgatacgctgcgtaccgacatgctgcgttgcgccaattccagc
aatttcaacattaacaatccggtttacggcaatctggcgcaatgcaacacggtttctgct
tccgatagcgatcaaacggagcaattgtcgacggcatcggtctatatgcaggacagcctg
catctgaccgagcaatggatattggtcggcggtctgcgctatcaatattacgatctctat
gcgggcaaggggcggcccttcaatgccaatactgatagcaatggcgatgcgcttattccc
aatggtggtatcgtctacaagctgacgccgcagatatcgctctacgccaatgcggcccgg
actttccggccccaatcgtcgatctcaagctattatggcaatctcgacccggaggagggg
acatcctacgagattggcagcaaatttgagctgatggagggtttgagcgcaaatgtcgcg
ctgttttccgcccgcaagaaaaatgtcgcctattccgagactattggtggtgagagcgtg
gtcaagacggcgggactggtgcgctcgcagggccttgaggtcgatgtggccggtcagttg
acggatcgttggcaggccattgcgagctatggctataccgatgccaaggtgctggaggac
ccggattatgccggcaagcaattgcccaatgtcgcccgccacaccggtagcctgtccgtg
gcctatgatgtcggtgacattggcggcgatgggaacagcttgaaggttggtggcggcatc
cgcgccgtgggcaagcgggcaggcatcaacagcaatagttatttcctgcccggctatgcg
gtcgtagatctgttcgctgcttacacgttcaacttcgagcgtccattgacgcttcaggtg
aatttgaagaatattttcgacaagacctattatacctcatcaatcggctcgaccaattac
gccaaccaggttggggaacccttcaatgtcacggtgagggccagtgtcaaattctag
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