Agrobacterium vitis VAT03-9: RvVAT039_22320
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Entry
RvVAT039_22320 CDS
T08809
Name
(GenBank) chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_22320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_22320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avv02035
]
RvVAT039_22320
Bacterial motility proteins [BR:
avv02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAT039_22320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF948
NPV_P10
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
BCH65016
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All DBs
Position
1:2433217..2435745
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AA seq
842 aa
AA seq
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MLFDRLLSRCKIQTKVLVFIVPFVLSISAVGLTGYYASRILQGQMEVTNSVVNTLSGFKN
VYAAMTAFLQKTTDASKTALDQELNKQLTSLKTMRISLDGLGGAAQVDAAIAGTESIAGQ
VKRLWDLDHGAADLRAALEADTQQLSSQQSDLLTYSTHVREALAKDESQAKTMLRDSDRL
TRGANLIADLVTDFNSATAPEAKMELVKTRMPELKKAVADIAAALPAEQAVLGTSLTDTV
QLLSSQVEIGVTNDTTVGAAEQAINLMRPVSIRLQGASTLKSRQATAVFGTLDQPIAEAT
ALLTATRQLVDISNGVELRSSRFMAAASADGLQKLQASLGTLKRRAAAMAKDPNVSDDIK
AKLSQIAPLTDAMADKATRLVAMDGQKTAAFLAAARDIDTIWSQLSDFAASQRQVADEQS
ASADTMSALALLAGVVIAIVAGIGLIATFKGPINQITAAMRRLASGDLEIEIAGGTRPDE
IGDMARALGVFKDNAEAKIRAEAEGARVRAESEAERARNDAEKQQADQDVQFAVMELAAG
LERLANGDVSATLDHPFAGRMEQLRSDFNRSLTRLKETIGLIQGNVTAIQGNVQQMAHST
DDLSRRTETQAASLEETAAAVNEVTSNVRQAADRAREVNDIVGETRGNAEKSAVVVGNAV
SAMGRIEDASKKIEQIISVIEEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQ
RSGRAAKDIKTLINTSTEEVNAGARLVQETGAALTVISQQIATISTHVEGIASASRDQSA
ALGEVNSAVGQMDSLTQQNAAMVEETSAASRQLADEADQLVGLLQQFKLESGTQAGRWDR
AA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgctatttgatcgtctactttctcgctgcaagattcaaaccaaggttctggtcttcatc
gttccgtttgttctcagtatttcggccgttggtctgaccggctactacgcatcgcgtatc
ctgcaagggcagatggaagtcaccaatagtgtggttaacacgctgagtggtttcaagaac
gtctatgcggcgatgacggctttcttgcaaaagaccacggatgcatcgaaaacggcactg
gatcaggagctgaataagcagttgaccagtttgaagaccatgcgcatctcgcttgacggt
ctgggcggagcagcccaggtcgatgcggcgattgccggaacggaatcgattgccggccag
gtcaagcgcctgtgggatttggatcatggcgcggcggatctgcgtgcagccctggaggcc
gatactcagcaattgtccagccagcagagcgatctgctcacctattccacccatgtccgt
gaggcgctggccaaggatgaaagccaggccaagaccatgctgcgcgattccgaccggttg
acgcgcggcgccaacctgattgccgatctggtcacagacttcaacagcgccaccgccccg
gaggcgaagatggagctggtcaagacgcggatgccggagctgaaaaaggccgttgccgat
attgccgccgcgctgccagcggaacaggccgtgctgggcacatcgctgaccgacaccgtt
cagcttttgtcctctcaggtcgaaatcggcgtgaccaatgacacgacggttggcgcagcc
gaacaggcgatcaacctaatgcgtccggtttccatccgcttgcagggcgcgtctaccttg
aaatcccggcaggcgacggcagtgtttggtacccttgatcagccgattgccgaagcgacc
gctttgctcactgccacacgtcagctggtggatatcagcaatggggttgaactgcgcagt
tcacgcttcatggcggcagcatcggcggatggcctgcaaaaattgcaggcgtcgctaggc
accctgaaacgccgtgccgcagccatggccaaggaccccaatgttagcgacgacatcaag
gcaaagctgtcgcagatcgccccattgaccgacgctatggccgataaggcgacccggctg
gtggccatggatggccagaaaaccgcggccttcctggccgctgcccgcgatatcgacacc
atctggtcgcagctcagcgattttgccgcctcccagcgtcaagtggccgatgaacagagc
gcctctgccgataccatgtcggcgctggctctgctggctggtgtcgttatcgccattgtc
gctggtatcggcttgatcgccaccttcaaggggccgatcaaccagatcaccgctgccatg
cggcgtctggcatccggcgatctcgagatcgagattgctggcggcacgcgccctgatgag
atcggcgatatggcccgcgcccttggcgtgttcaaggataatgccgaagcaaagattcgc
gccgaggccgagggcgcgcgggttcgcgctgaaagcgaagccgagcgcgcccgcaatgat
gcggaaaagcagcaggccgaccaggacgtgcaatttgcggtgatggaactggccgccggg
ctggagcgtctcgccaatggcgatgtttccgccacgctggaccatccctttgccggacgc
atggaacagttgcgcagcgatttcaaccgctcgctgacccggttgaaggaaaccatcggc
ctgatccagggcaatgtcacggccattcagggcaatgtgcagcaaatggcccattccacc
gacgacctgtcgcgccgcacggaaacccaggctgcctcgctggaagaaaccgccgctgcc
gtcaacgaagtcacctccaatgttcgccaggccgctgacagggcgcgggaggtcaatgac
atcgtgggcgaaacccgggggaatgccgagaaatcggctgtcgtggtcggcaatgccgtc
tctgccatgggccggatcgaggatgcctcaaagaagatcgagcagatcatcagcgtcatc
gaggaaatcgccttccagaccaatctgttggcgctgaatgccggtgtcgaggccgcccgt
gcgggcgaggcgggcaagggctttgccgtcgttgcccaggaagtgcgcgagcttgcgcaa
cgctctggccgcgccgcaaaagacatcaagacgctgatcaacacctccactgaagaggtc
aatgccggggcgaggctggtgcaggaaaccggtgcggcgctgaccgtcatcagccagcag
atcgccacgatcagcacgcatgttgaaggcatcgctagtgccagccgcgaccaatcggca
gcccttggcgaagtcaacagcgccgtcggccagatggacagcctgacccagcaaaacgcc
gccatggtcgaagaaacctccgccgccagccgccagctggccgacgaggcggatcaattg
gtgggactgttgcagcagttcaagctggaaagtgggacgcaggctgggcgttgggaccgg
gcggcttga
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