Agrobacterium vitis VAT03-9: RvVAT039_22370
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Entry
RvVAT039_22370 CDS
T08809
Symbol
tetA
Name
(GenBank) tetracycline efflux MFS transporter Tet(30)
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_22370 (tetA)
01504 Antimicrobial resistance genes [BR:
avv01504
]
RvVAT039_22370 (tetA)
Transporters [BR:
avv02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RvVAT039_22370 (tetA)
Antimicrobial resistance genes [BR:
avv01504
]
Gene variants
Tetracycline resistance genes
Transporters
RvVAT039_22370 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
Nuc_H_symport
LacY_symp
ATG22
Motif
Other DBs
NCBI-ProteinID:
BCH65021
UniProt:
A0AAN1X040
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Position
1:2439717..2440910
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AA seq
397 aa
AA seq
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MNKALVVIFATVALDAVGFGLIFPILPALLREVTHIQNVAPYIGLLVALHAVIQFIFAPI
LGSLSDRLGRRPILLISLAGAAVNYLFLAFADNLWLLLLGRAITGLTSANMSVATAYVTD
ISREDQRARRFGLFNAMFGLGFIFGPIIGGALGDYWLRLPFIAAAVLNGGNLLLAFFVLP
ESRTPTREKIDLAAINPLRPLKWALSLKNLLPMVILFFIFSLTGEAYATCWALWGGDAFQ
WNGLWIGLSLGAFGICQALAQTFLPGPAVKLFGERIAILIGVSSACFSLTVIAFATESWM
VFAIMPVFSLSGIGVPALQSLATAQVDADKQGQFQGVLASALSLAAIIGPLMFSSVYFLI
RDYWPGGIWMAVIAVYAISVPLVLGLRLKAKTSGKAV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctctcgtcgtcattttcgccaccgtcgctctcgatgcggttgggtttggc
cttatctttcccattctgccggctttgttgcgggaggtgacgcatatccagaatgtggcg
ccctatattggtctgttggtggcgcttcatgctgtcattcagtttatctttgcgccgatc
ctgggatcgctcagtgatcggcttggtcgccggccgatcctgttgatttcgctggcgggg
gcggcggtcaattatctgtttctcgcttttgccgacaatctctggctgctgctgctgggt
cgcgccattaccgggttgaccagcgccaatatgtcggtggcgacggcctatgtgacggat
atttcgcgggaggatcagcgggcgcggcgctttgggctgtttaatgcgatgttcggcctg
ggctttatcttcgggccgattatcggcggagcgctgggggattattggttgcggctgccc
ttcattgccgctgccgtgctgaatggcggcaatctgctgctggcgtttttcgtcctgccg
gaatcccgcacgccgacgcgggagaagatcgatctggcggccatcaatccgctgcggcct
ttgaaatgggcgttgtcgctgaaaaatctgctgccgatggtcatcctgtttttcatcttc
agcctgacgggtgaagcctatgccacctgctgggcgctgtggggtggcgatgcgtttcag
tggaacgggctgtggatcggcctgtcgctcggcgcgttcggcatctgtcaggcgcttgcc
cagacctttcttcccggtccggcggtcaagctgtttggcgagcggatcgccattctgatc
ggcgtttccagcgcctgcttttcgttgaccgtcattgcctttgcaaccgaaagctggatg
gtgtttgcgatcatgccggttttttccctgagcggcatcggcgttccggccctgcaatcg
ctcgcaaccgcccaggtcgatgcggataagcaaggccaattccagggcgtgctggcttcc
gccctcagcctcgccgccattatcggccccctgatgttttcaagcgtctactttctcatc
cgggactattggccgggcggcatctggatggcggtcattgccgtttatgctatcagcgtc
cccttggttctgggcctgcgtctcaaggctaaaaccagcgggaaagccgtttag
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