Agrobacterium vitis VAT03-9: RvVAT039_23090
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Entry
RvVAT039_23090 CDS
T08809
Symbol
ispB
Name
(GenBank) octaprenyl-diphosphate synthase
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00900
Terpenoid backbone biosynthesis
avv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RvVAT039_23090 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
avv01006
]
RvVAT039_23090 (ispB)
Enzymes [BR:
avv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
RvVAT039_23090 (ispB)
Prenyltransferases [BR:
avv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RvVAT039_23090 (ispB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GNAT_like
Motif
Other DBs
NCBI-ProteinID:
BCH65093
LinkDB
All DBs
Position
1:complement(2519739..2520755)
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AA seq
338 aa
AA seq
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MGAVIPLGDKKNKQASVQPLVDLTRNGMERVNQLILSKAGSDVQMIPEVANHLISSGGKR
LRPMLTLASAAMFGYEGEGHIKLATSVEFMHTATLLHDDVVDESDLRRGKSTARMIWGNQ
ASVLVGDFLLGQAFRMMVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTEDDYQAV
IRAKTAALFAAAAEVGPIVAGTDKAARNALKSYGMNLGLAFQLVDDALDYGGKVADLGKN
TGDDFREGKITLPVILAYRRGNETERGFWREALEGGRHDDANLEKAMGLITKYNGLSDTV
ARAIHYGDVARDALAPVPDGVWKDALMDVIDFCIERVS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgcagtgataccgcttggtgacaagaaaaacaaacaggcctcggtgcaacctctg
gtggacctgacccgcaacggcatggagcgggtcaatcaactgatcttgtccaaggcaggc
tccgatgtccagatgatcccggaagtcgccaatcacctgatttcctctggtggcaagcgc
ctgcgcccgatgctgacgctggcctccgccgcgatgttcggctatgaaggcgaaggccat
atcaagctcgccaccagcgtcgaattcatgcacactgccacgctgctgcatgacgatgtg
gtggatgagagcgacctcaggcgcggcaaatccaccgcccggatgatctggggcaaccag
gccagtgtgttggtaggcgatttcctgcttggccaggcgttccggatgatggtcgaggtc
ggctcgctggaagcgctggatgtcttgtcaacggcggcctcggtgattgccgagggcgaa
gtgcttcagctttcggtcgccaagaatatggaaaccaccgaggacgactatcaggcggtc
attcgtgccaagacggcggcgctgtttgccgccgctgccgaggtcggtcctatcgtggcg
ggaacggacaaggccgcgcgcaacgcgctcaaatcctacggcatgaatttgggcctggcc
ttccagctggtcgatgatgccctggattacggcggcaaggtcgccgatctcggcaagaat
accggtgacgatttccgcgagggcaaaatcaccctgccagtcattctcgcctaccggcgc
ggcaacgagaccgagcggggcttctggcgcgaagcgctggaaggcggcaggcatgacgat
gccaatctggaaaaggccatggggctgattaccaaatataacggtctttccgatacagtg
gcgcgggccattcactatggcgacgtcgcccgcgatgccttggcgccggtgcctgacggc
gtctggaaagatgccttgatggacgtgatcgatttctgcatcgaacgggtcagttaa
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