Agrobacterium vitis VAT03-9: RvVAT039_23180
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Entry
RvVAT039_23180 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAT039_23180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avv01007
]
RvVAT039_23180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_23180
Enzymes [BR:
avv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
RvVAT039_23180
Amino acid related enzymes [BR:
avv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RvVAT039_23180
Transfer RNA biogenesis [BR:
avv03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAT039_23180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
BCH65102
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All DBs
Position
1:2528331..2530892
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AA seq
853 aa
AA seq
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MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLVLDIRGLT
ARSADVKEEKKGPSVSAPEKAIEGFLRGAGLASIDQAVVKTDPKKGDFYVAMIDKPGRSA
EEIITEAMPGIIRSFPWPKSMRSGSASMPKGSRYGGIEGKGSESLRWVRPLQSILCTFGS
EHDEVAIIPFEIDGITASNVTYGHRFHAPDAITVRRFDDYVSSLEKAKVILDAERRKDII
LHDARDVAFANGLDLVEDEGLLEEVSGLVEYPQVLLGTFEADYLSIPSEIIRLTIKTNQK
CFVTRPIGESDALSNHFILISNIAAHDGGAEIIHGNGKVVRARLSDALHFWKRDQGNLPD
LETLKASADKFGLDLKKPLDQRMAKLDALNVTFHAKLGSQGERVARIRALAKVLAPVVGA
DEALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGEHESVAAAIEDHYKPQGPSD
RLPEDKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKGIRLPLL
EVVSYWYKSLLNWAIDSDRSVAAVNRNQVDSKGVLVGPLLSIVAHQENALSSNAQFLSIS
QPGVGSLDDIDIMGQGGQERLPALFLTLGGVETDLLSFFHDRLKVYLRDQGARHDIIDAV
LAAPSSGPAGHLLPAGEKRELGDAVSASSPQRGEGSAAVRQGQTAQGEGAFSAADDLLMV
ARRAEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTVVADGVSEALLTLDAEKALYAA
IVQATQSAAEAVAKEDFRSAMQALSTLRAPVDTFFEDVLVNDEDAAIRANRLALLKAIRE
ATGTVADFSKIAG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcttctgcttgaacttcgctccgaggaaatccctgcacgtatgcaaaggaaa
gcggcgggtgatctgaaaaagctggtcacggatgcacttgtcgatgcgggcctgacctat
gaaggcgcgcgggaatattggacaccacgtcggctggtgctggacattcgcggcctgacg
gcccggtccgccgatgtgaaggaagaaaagaaggggccaagcgtctcggcacccgaaaag
gccatcgagggctttttgcgcggcgcggggcttgcctccatcgatcaggccgtggtcaag
accgatcccaagaagggtgatttctacgtcgcgatgatcgacaagccgggccggtcagcg
gaagagatcattacagaggcgatgccgggcattatccgcagctttccctggccgaagtcc
atgcgatcaggttcggcgtccatgccaaagggttcacgctatggcggcatcgaaggcaag
gggtcggaaagcctgcgctgggtgcggccgctgcaatccattctctgcaccttcggctcc
gagcatgacgaagtggcgatcattcccttcgaaatcgacgggatcaccgcctccaacgtg
acctatggccaccgtttccacgcgccggatgccatcaccgtgcgacgcttcgacgattat
gtgtcgagcctggaaaaggccaaggtgatccttgatgccgagcggcgcaaggacatcatc
ctgcatgacgcccgcgacgtggcctttgccaacgggctggacctggtggaagacgagggc
ctgctggaagaagtgtccggcctggtggaatatccgcaggtcctgcttggcacgtttgag
gcggattacctgtcgataccctcggaaatcatccggctgaccatcaagaccaaccagaaa
tgcttcgtcacccggccaattggcgagagtgacgcgctctccaaccatttcatcctgatc
tccaacatcgccgcccatgacggcggcgcggaaatcatccacggcaatggcaaggtggtc
cgcgcccgcctgtccgatgccctgcatttctggaagcgcgaccagggcaatctgccggat
ctggaaacgctgaaagcttctgctgacaaattcggcctcgacctgaaaaagccgctcgac
cagcggatggccaagctggatgcgctgaacgtgaccttccacgccaagcttggcagccag
ggcgagcgggtggcccgcatccgcgctttggccaaggttctggctcctgtcgtcggtgca
gatgaagctttggtggaccgcgccgtggtgctggccaaggccgatttgcgcaccgaagcc
gtcggcgaattccccgaactgcaaggcctgatgggccgcaaatatgcgacgctacaaggc
gagcacgaaagcgtcgccgccgccatcgaggatcattataagccgcaaggcccatcggat
cgcctgccggaagacaaggtggcgatcaccgtggccctggccgataagctggatacgctg
gttggtttctgggcgattgatgaaaagccgacaggatcgaaggacccgtttgcgctgcgg
cgggcggcgttgggtgtggtgcggattttgttggagaagggcatccggttgcctctgctg
gaggttgtgtcttattggtacaagtcgcttttgaattgggctattgattccgatcgttca
gtagcggctgtaaataggaaccaagtagattcaaagggtgttcttgttgggcctctgcta
tctattgtagcgcaccaagaaaacgcactttcctctaatgctcagtttttgagtatttcg
caaccgggtgtcggttctttggatgatattgacattatgggtcaaggtggacaagagcgc
ctcccagcgttgtttttgaccttaggaggagtagaaaccgacctcctctccttcttccat
gaccgcctcaaggtctacctccgagaccaaggcgctcgtcacgacatcatcgacgctgtg
ctcgccgccccctcatccggccctgcgggccaccttctccccgctggggagaagagggag
cttggcgatgcggtgtcggcctcctctccccagcggggagaggggagtgcggctgtccgg
cagggccagacagcgcagggtgagggggctttctctgcggccgacgacctgctgatggtc
gcccgccgggccgaagccctcacggccttcatcacctccgaagacggcaagaacctgttg
gcgggcaccaagcgcgccacgcagctgctggcggcggaggaaaagaaggggacggtggtg
gccgatggcgtgtccgaggcgctgctgacactcgacgccgaaaaggcgctttacgccgcc
atcgtgcaagccacccaatccgcagccgaggccgtcgcaaaagaggatttccgctccgcc
atgcaggcgctttccaccctgcgcgccccggtcgatacattcttcgaggatgtgttggtc
aatgacgaggacgccgccatccgcgccaatcgcctggcgctgttgaaggccattcgcgag
gcaaccggcacggtggcggatttctccaaaatcgccgggtaa
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