Agrobacterium vitis VAT03-9: RvVAT039_23250
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Entry
RvVAT039_23250 CDS
T08809
Name
(GenBank) RNA-binding protein
KO
K06959
protein Tex
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RvVAT039_23250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BCH65109
LinkDB
All DBs
Position
1:2536840..2539152
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AA seq
770 aa
AA seq
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MADDIKSIAALIASEINARADQVISAVDLLDGGATVPFIARYRKEVTGGLDDTQLRNLAE
RLTYLRELGARRKAIVESITSQDKMTDELAIKIARTTTKAELEDIYLPYKPKRRTRAEIA
REKGLEPLANAIWEDRTSDPAKLAEAYVKGEVADVKAALEGARDIVAEAMAENADLLKSL
RNYLKDKAILYAKVVDGKQASGEKFADYFDHFERWATVPGHRALAMLRGWNEEILTLTIE
ADKDDTSLIKPTHRMIASAYQIGQKGPADQWLMEVAGWTWRVKLSMSLSLDLMRDLRERA
EEEAIHVFARNLKDLLLAAPAGSRPTMGLDPGIRTGVKVAVVDGTGKVLETTTVYPFPPK
NDIRGTQAELAGLIRKHGVDLISIGNGTGSRETEKLVADMLTQLPATGKKPTKVIVSEAG
ASVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVDQGRL
GRSLDAVVEDAVNAVGVDLNTASAPLLARVSGLGGSIAEAIVAHRDQTGPFSSRKDLLKV
ARLGARTFEQCAGFLRIPDGKEPLDASSVHPEAYGVAKKIVAACGRDLRTLMGDSSLLKG
LDPRQFVDEQFGLPTVKDILAELEKPGRDPRPSFKTATFADGVEEITDLKPGMLLEGTVT
NVAAFGAFVDIGVHQDGLVHVSQLADKFVKDPHEVVKAGDVVKVRVVEVDVKRKRIALTM
RKDGGEAPPPSARDNRGPAVMRNANPKPARDEKPVMGGLGAALAEAMRKK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatatcaaatccattgccgcactgattgcgagcgagatcaatgcccgagcc
gatcaggtgatctctgcggtggatttgctggatggtggcgcgacggttcccttcatcgcc
cgctaccgcaaggaagtgaccggcgggctggatgatacgcaattgcgcaatctggccgag
cgcttgacctatctgcgtgagcttggcgcgcgccgcaaggcgattgtcgagagcatcaca
tcacaagacaagatgaccgatgaactggccatcaagattgcccgcaccaccaccaaggcc
gagctggaagacatttatctgccctataagcccaagcgccgcacccgtgccgaaattgcc
cgtgaaaagggtttggagccgctggccaatgcgatttgggaagaccgcactagcgacccg
gccaagctggcagaggcctatgtgaagggcgaagtggccgacgtcaaagcggcactggaa
ggcgcacgtgatattgttgccgaagccatggcggaaaatgccgacctgttgaagagcctg
cgcaattacttgaaagacaaggccattctctatgccaaggtggtcgacggcaaacaggcg
tctggcgagaaattcgccgattatttcgaccatttcgagcgttgggcgacggtgccgggc
caccgggccttggccatgctgcgtggctggaacgaagagattttgacgctgaccatcgag
gcggacaaggacgacacttcactgatcaagcccacccatcggatgattgcgtcagcctat
cagatcggccaaaaaggccccgccgaccaatggctgatggaggtggcgggctggacctgg
cgggtgaaactgtccatgtcgctgtcgctggatttgatgcgcgacttgcgtgagcgggcc
gaggaagaggcgatccacgtttttgcccgtaatctcaaggatttgctgctggcggccccc
gccggttcgcgccccaccatggggcttgatccgggcatccgcaccggcgtgaaagtggcg
gtggtggatggcaccggcaaggtgctggaaaccacgacggtctatcctttcccaccgaaa
aacgacattcgcggcacccaggccgagctggcgggcctgatccgcaagcatggcgttgac
ctgatctccatcggcaatggcaccggcagccgtgagacggaaaagctggtggccgatatg
ctgacgcaattgcccgcgaccggcaagaagcccaccaaggtcatcgtctcggaagcaggc
gcctcggtctattcggcgtcagaactggccgccaaggaattccccaatctcgatgtctcc
ttgcgcggggccgtgtccattgcccgtcgcttgcaggatccattggcggaactggtgaaa
atcgatccgaaatccatcggcgttggccagtatcagcatgatgtcgatcagggccgtcta
ggccgttcgctggatgccgtggttgaagatgcggttaatgcggtgggtgtcgatctcaac
accgcatcggctccgcttctggcgcgggtgtcggggttgggcggctcgatagccgaagca
atcgttgcgcatcgtgatcagacaggtccgttttccagtcgcaaggatctgttgaaagtg
gcgcggctgggtgcgcgcacgtttgagcaatgcgccggatttctgcgcattcccgatggc
aaggagccgctggatgcctcttctgttcacccggaagcttacggcgtcgccaagaaaatc
gttgcggcctgcgggcgggatctgcgcacgttgatgggcgacagcagcctgttgaaaggg
ctggacccgcgccagttcgtcgatgagcaattcggtctgcccacggtgaaggacattctc
gccgagctggaaaagccgggccgcgacccgcgtccaagcttcaagaccgccacctttgcc
gatggtgtagaagaaatcaccgacctgaaacccggcatgttgctggaaggcacagtcacc
aatgtcgcggccttcggggcctttgtcgatatcggcgtgcatcaggatggcttggtgcat
gtctcgcaactggccgacaagttcgtcaaggacccgcatgaggtggtaaaagccggtgat
gtggtcaaggtccgagtggtggaagtggatgtgaagcgcaagcgcattgcgctcaccatg
cgcaaggatggtggagaagcgccgccgccatccgcccgcgacaatcgcggcccggcggtg
atgcgcaatgccaatccgaaaccggcccgtgatgaaaagcccgtgatgggtggccttggg
gcggcgctggctgaggcgatgcgcaagaaatag
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