Agrobacterium vitis VAT03-9: RvVAT039_23590
Help
Entry
RvVAT039_23590 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_23590
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_23590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avv02035
]
RvVAT039_23590
Bacterial motility proteins [BR:
avv02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAT039_23590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CHASE3
HAMP
DUF948
SIT
Motif
Other DBs
NCBI-ProteinID:
BCH65143
LinkDB
All DBs
Position
1:2579459..2581402
Genome browser
AA seq
647 aa
AA seq
DB search
MKILDNIRIVAKIGLTFAILLTVSLVVNVVSWRSLSNQEESSGWTVHTYVVLQKMDAIVA
SMVNQETGIRAYLLSEADEKFLEPQKAGLKNYTDAYAAVRSLTSDNQVQQKRLADLDSMV
QDWQTKVVAKELALAKDPATRDQGRQLEISGAGKTYMDGIRAKAKEIADEESALLSVRQK
AADAAAYDARRNILLGSGTLVLLIGLSLLLLNKGMIAPLTRITASMRSLATGETAIDIPG
IGRRDEVGHMADAVEVFRKNAIANRELEEQATVNRQQTAQTQAAHQQRAEQEAANLRFAT
QTLGEGLKRLAQGDVSFQLNDAFAAEYESLRQDFNASLEQLGTTLGSVLQTVEGMENGTR
EIADGTNDLSKRTEQQAAALEETAAALDQITVNVTNSSQRTEEARSVAITANQNAVRSSE
VVNQAENAMKRIEESSQQISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQE
VRELAQRSAQAAKEIKGLIQNSSSEVDSGVKLVRETGVALKSIGDHVVQINQLMEAIATS
AREQSTGLAEVNSAVNQMDQTTQQNAAMVEQSTAAAAALATEANRLKTLVSQFQLAGRRS
SFAGHPAVASASQRPIASPARALASKIGKAFGGGASSAAVKQEWAEF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggataatatacggatcgtagcaaaaattggactgacatttgcaatcttg
cttactgtcagtcttgttgtgaatgtggtcagctggcgttcgctctccaatcaggaagag
tcgtccggctggactgtgcatacctatgtcgtgctgcaaaagatggatgccatcgttgcg
tcgatggtcaaccaggaaactggtattcgggcttaccttctgtcggaagcggatgaaaaa
ttccttgagccgcaaaaggctggcttaaagaattatactgatgcctatgcagctgttcgc
agcctgacatctgacaatcaggtccagcagaagcgtctcgccgacctggattcgatggtt
caggattggcagacgaaagtcgttgccaaggagcttgccctggcgaaagacccggcgacc
cgcgatcagggccgccagttggagatttccggtgcgggcaagacctatatggatggcatt
cgcgccaaggccaaggaaattgccgatgaggaaagcgcgcttctcagcgtgcgccagaaa
gctgctgacgccgccgcctatgatgcccgccgcaatattctgctgggcagcggtacgctt
gtcttgctgatcggtttgtcgcttcttctcctcaacaagggcatgattgcgccgctgacc
cggatcacggcgtcaatgcgcagccttgcaactggtgaaacggcaatcgacatccccggc
attggccgccgcgacgaagtcggtcatatggccgatgcggttgaagtgttccgcaagaac
gccattgccaatcgcgagttggaagagcaggcaacggtcaaccgccagcaaacggcacag
acccaggctgcccatcaacagcgcgctgagcaggaagcggccaatctgcgatttgcaacg
cagacccttggcgagggcttgaagcgcctggcgcagggcgatgtgtccttccagctcaac
gatgctttcgccgctgaatatgaatcgctgcgccaggatttcaacgcctcgctggaacag
cttggaacgacgctcggctccgttctccagaccgtcgaaggcatggaaaacggcacccgt
gaaattgccgatggcacgaatgatctgtccaagcggaccgagcagcaggccgcagccctg
gaagaaacggcggcggcgctcgaccagatcaccgtcaatgtgaccaattcctcgcagcgc
acggaagaagcccggtcggtggcgattacagccaaccagaacgccgtgcggtcgtcggaa
gtcgtcaatcaggccgaaaacgccatgaagcggatcgaggaaagctcgcagcagatttcc
aacatcatcggcgtgatcgatgaaatcgctttccagaccaatcttctggcactgaatgcc
ggtgtcgaagcagcgcgcgccggtgaagccggtaagggctttgcggtggttgcccaggaa
gtgcgtgaattggcgcaacggtctgcccaggcagccaaggaaatcaagggtctgatccag
aactcctcttctgaagtcgatagcggcgtcaagctggtgcgggaaaccggtgttgccctg
aagtcgatcggcgatcacgtggtccagatcaaccagttgatggaggcaatcgccacatcg
gcaagggaacagtccaccggtcttgccgaagtcaattcggcggtcaaccagatggaccag
acgacgcagcagaatgccgccatggtcgagcaatcgaccgccgctgctgcagctcttgcc
accgaagccaaccgtctgaagacgcttgtcagccagttccagcttgcgggccggaggtca
tcatttgccgggcatccggcagttgccagcgcatcgcagcgtccaattgcctcacccgcc
cgtgctcttgcctccaagatcggcaaggctttcggcggaggcgcatcgtccgccgccgtg
aaacaggaatgggcggaattctga
DBGET
integrated database retrieval system
