Agrobacterium vitis VAT03-9: RvVAT039_23610
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Entry
RvVAT039_23610 CDS
T08809
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RvVAT039_23610 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_23610 (xseB)
Enzymes [BR:
avv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RvVAT039_23610 (xseB)
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RvVAT039_23610 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RL10P_insert
Motif
Other DBs
NCBI-ProteinID:
BCH65145
LinkDB
All DBs
Position
1:complement(2583738..2583989)
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AA seq
83 aa
AA seq
DB search
MTDVAATDIAAYSFEKAVAELESIVARLERGDVALDESISIYERGELLKKHCEALLSAAE
NRIEKIRLDRAGKPVGAEPLDKD
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgttgccgccaccgatattgccgcttattcctttgaaaaggccgtggccgag
ctggaaagcatcgtggcgcggctggagcgcggtgatgtggcgctcgacgaatccatctcg
atctacgagcgcggcgagttgctgaagaaacattgcgaggcactgttgtcggcagccgaa
aaccgcatcgagaaaatcaggctggaccgggccggcaagcctgttggtgccgagccgctg
gacaaggactag
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