Agrobacterium vitis VAT03-9: RvVAT039_23930
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Entry
RvVAT039_23930 CDS
T08809
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00190
Oxidative phosphorylation
avv00860
Porphyrin metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RvVAT039_23930 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAT039_23930 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
avv01006
]
RvVAT039_23930 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
avv03029
]
RvVAT039_23930 (ctaB)
Enzymes [BR:
avv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
RvVAT039_23930 (ctaB)
Prenyltransferases [BR:
avv01006
]
Compound prenylation
Protoheme farnesyltransferase
RvVAT039_23930 (ctaB)
Mitochondrial biogenesis [BR:
avv03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
RvVAT039_23930 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
BCH65177
UniProt:
A0AAN1X1Z4
LinkDB
All DBs
Position
1:2615776..2616732
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AA seq
318 aa
AA seq
DB search
MAAIDNSNIIGLDSEICLSEAGAKDFFALLKPRVMSLVVFTAFAGLVLAPGTINPILGVI
AILCIAVGAGASGALNMWYDADIDAVMTRTARRPIPAGRIRPQEALAFGITLSVFSVSIL
GLAVNWFAAAFLAFTILFYAVVYTMWLKRSTPQNIVIGGASGAFPPMIGWACVTGGVSLD
SVILFMVIFLWTPAHFWALALYKMRDYGSVGVPMMPNVAGETSTKRQMFVYAVLTGVFAV
APAFTGLSSLWYGLVAGVLSAVFVACSVAVWRMPEGDERMAPARKMFAYSIFYLFAVFSA
LLVDHYAANLIAHASGAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatagacaacagcaacatcatcggtctggacagtgagatctgtctgtccgaa
gcgggcgcgaaggatttcttcgcgctgttaaagccgcgggtgatgtcgcttgtggtgttc
acggccttcgcaggtctggtgctggcaccaggcacgatcaaccccattctgggtgtcatt
gccatcctgtgcattgcggttggggctggcgcctccggcgctctcaatatgtggtatgat
gccgatattgatgcggtgatgacccgcacggcgcgccgccccatcccggcaggccgtatc
cgtccgcaggaggcgctggccttcggcatcacgctgtcggtcttttcggtctcgattctt
ggcctcgcggtcaattggttcgccgccgcctttctggccttcacaatcctgttttacgct
gtcgtctatacgatgtggctgaagcgctcgaccccgcagaatatcgttattggtggcgca
tcgggtgccttcccgccgatgatcggctgggcctgcgtgacaggtggcgtgtcgctggat
agcgtcatactgttcatggtgatcttcctgtggacgccagcacatttctgggccctggcg
ctctacaagatgcgcgattacggctcggtcggcgtgccgatgatgccgaatgtggcgggt
gaaacctcgaccaaacggcagatgttcgtctatgcggtgctgaccggggtctttgccgtg
gcaccggctttcaccgggctttcttccctctggtacgggctggtagcgggtgtgctgagt
gcggtgtttgtcgcctgttctgttgctgtctggcggatgcctgagggcgatgagcgcatg
gcgccggcccgcaagatgtttgcctattcgatcttctacctgtttgcggtgttttcagcc
ctgctggtcgatcactacgcggcgaacctcatcgctcatgcttcgggagcgctgtga
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