Agrobacterium vitis VAT03-9: RvVAT039_24310
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Entry
RvVAT039_24310 CDS
T08809
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avv03036
]
RvVAT039_24310 (smc)
Chromosome and associated proteins [BR:
avv03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RvVAT039_24310 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BCH65215
LinkDB
All DBs
Position
1:2651936..2655397
Genome browser
AA seq
1153 aa
AA seq
DB search
MKFTKLRVVGFKSFVEPTEFIIERGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG
MDDVIFSGSGNRPARNSAEVGLYLDNSDRTAPAAFNDSDEIQVSRRIERENGSVYRINGK
EARAKDVQLLFADASTGARSPSMVGQGRIGELIQAKPQARRQLLEEAAGISGLHSRRHEA
ELRLRAAETNLERLEDIVAQLESQIESLKRQARQANRFKMLSADIRARDAMLLHIRWTEA
RQAEAEAEASLNETTSLVAERAQAQMEAAKAQAIASLQLPALRDEEVKAAASLQRLQIAR
SQLEEDAGRLFKRRDELTRRLLQLEEDIAREQRLVDDNAEILERLAAEEAELDEVLTESG
QEADDLRIAFEEASATLADSEARFAAATAERAEAAAGRNQLERALRDLADKRLRLERQAE
EAGRELDAVAEKLAALPDPEEKREVVEAGEYAVEEAESTVAQAEEALSAARRAEALARGP
VEAARSTLAALETEAKTIAKMLASSASAGEFSPVADALTVERGFETALGAALGDDLESPL
DAQAPAHWAMPGPDGDDPALPAGIVALAAHVSAPQALSRRLKQIGITDADTAQRLQPDLK
PGQRLVTREGAVYRWDGHVTGSEAPSAAALRLAQKNRLKALEEEVDEARIGLEDAEEQLT
AAREAVTSSEAHLGEGRERQRLILRQLSEAREALSAAERASGDLLRRRAVVEEAVNGLRA
QIEEAESLAEEAQIALADQADLTALDEQLRQLQMEVATGRGLVAEARARHEGFARENDQR
QRRIMAIRQERQSWAQRAASASQHIATLREREEEARDEMADLDAAPDEFDEKRRLLMGEL
DKAEAARRAAADRLVEAEARQRQADQTAASALSALAEARERRGRAEERLLSGRERRKDAE
ARIQEALNVGPHEAFRLTGLKPDDAIPDLREVERDLDRLKIERERLGAVNLRADEEQKEL
SDKLAALIKERDDVIDAIRKLRGAIQSLNREGRERLVAAFDVVNAQFQRLFTHLFNGGTA
ELQLIESDDPLDAGLEILARPPGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVLD
EVDAPLDDHNVERYCNLMDEMAASTQTRFVIITHNPITMARMNRLFGVTMAEQGVSQLVS
VDLQTAEQLREAV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccaagcttcgtgtcgtcggcttcaaatcctttgtcgaaccgacggaattc
atcatcgaacgcggattgaccggggttgtcgggccgaacggctgcggcaagtccaatctg
gtcgaggcactgcgctgggtgatgggggaaaactcctataagaacatgcgcgcttccggc
atggatgacgtgattttttccggctccggcaaccgccccgcccgcaattcggcggaggtt
gggctttatctcgacaattccgaccgcaccgcgcccgccgccttcaatgacagcgacgaa
atccaggtcagccgccgtatcgagcgggaaaacggctcggtctatcgcatcaatggcaag
gaagcccgcgccaaggatgtgcaattgctgtttgccgatgcctcgaccggggcgcgctcg
ccgtcgatggttggccaggggcggattggcgaactcatccaggccaaaccgcaggcacgc
cgacaattgctggaagaagccgctggcatttccggactgcattcgcgccgccacgaggcg
gaactgcggctgcgtgcggccgaaaccaatctggagcggctggaggatatcgtcgcccag
ctggaaagccagatcgagagcctgaagcgccaggcccgtcaggccaatcgcttcaagatg
ctgtctgccgatatccgcgcccgtgatgccatgctgttgcacatccgctggacggaagcg
cggcaggccgaggctgaggcggaagcgtcgctcaacgagacgacctcgctggtggccgaa
cgggcgcaggcgcagatggaggcggccaaggcccaagccattgccagtctgcaattgcct
gcgttgcgtgacgaagaggtcaaggccgcagccagcctgcaacgcttgcagattgcccgc
agccagctggaggaagatgccggacggctgttcaaacgccgcgatgaactgacccggcgg
ctgttgcagctggaagaagacattgcccgcgagcaacggctggtcgatgacaatgccgaa
attctcgagcggctggctgccgaggaagccgaactggacgaggtgctgacggaaagcggc
caggaggccgacgatctgcgcattgctttcgaggaagcatcggcaacccttgccgatagc
gaagcccgctttgctgctgccaccgccgaacgcgccgaagcggcagccgggcgcaaccag
ttggaacgggctctacgcgacctcgccgacaagcgcttgcggctggagcgtcaggccgaa
gaggcaggccgcgaactggacgccgtggccgaaaagctcgccgccctgccggatccggag
gaaaagcgcgaggtggtggaagccggtgaatatgcggtggaagaggccgaaagcacggtt
gcgcaagcggaagaggctttaagtgccgcccgccgggccgaggcactggcccgcggcccg
gtggaagccgcccgctctacattggcggcgctggaaaccgaggcgaaaaccattgccaaa
atgctggcctcttcggccagcgccggagagttttcgccggtggccgatgcactgacggtg
gagcgcggctttgaaaccgcgctgggtgccgcccttggcgacgatctggaaagcccgctc
gacgcacaggctccagcccattgggccatgcccgggccggatggtgatgatccggctttg
cccgctggcatcgtggcgcttgcagcccatgtttccgcgccgcaagcgttgtcccgccgc
cttaaacagatcggcatcacagatgcggacaccgcgcaacgtctgcaaccggatctgaaa
cccggccagcggctggtgacgcgggaaggggccgtctatcgctgggatggccatgtcacg
ggttccgaagcgccgagtgcggcggcccttcgtcttgcccagaagaaccgtctgaaggcg
ctggaggaagaggttgacgaggctcgcatcgggctggaagacgctgaagaacaattgacg
gcagcgcgcgaggcggtgacgtcgagcgaagcgcatcttggcgaagggcgtgagcgccag
cggttgatcctgcgtcagctgtcggaagcccgcgaggctttgagcgctgccgagcgggcc
agcggcgacctgctgcgccgccgcgccgtggtggaagaggcggtgaatgggcttcgcgcc
cagatcgaagaggccgaaagcctggccgaggaagcgcagattgcccttgccgatcaggcc
gatctgacggcgctggacgaacaattgcggcaattacagatggaggttgccaccggtcgc
ggattggtggccgaagctcgtgcccgccatgaagggtttgcccgcgaaaatgaccagcgc
cagcgccggatcatggcgatccgtcaggagcggcaaagctgggcgcagcgggcggcaagt
gccagccagcatatcgccacgctgagggagcgcgaggaagaagcccgcgacgaaatggcc
gacctggacgctgcccccgacgaattcgatgaaaaacgccgtctgctgatgggcgagctg
gacaaggccgaagccgcgaggcgtgctgccgccgaccggctggtggaggccgaggcccga
cagcgccaagccgatcagacagcggctagcgccttgtcggcgctggccgaagcccgtgag
cgccggggccgggcggaagaacggctgctgtctggacgcgagcggcgcaaggatgccgag
gcccgcattcaggaagcgctcaatgtcggcccgcacgaagccttccgcctgacagggctg
aaacccgatgacgcgatccctgatctgcgcgaggtcgagcgcgatctggaccggctgaaa
atcgaacgcgaacggctgggtgccgtcaacctgcgcgccgatgaagagcagaaggaattg
tccgacaagctcgcagccctgatcaaggagcgcgacgacgtgatcgacgcaatccgcaaa
ctgcggggtgcaatccagagcctgaaccgcgagggccgggaacggctggtggcggctttc
gacgtggtcaatgcgcaattccagcggctgttcacccacttgtttaacggcggcacggcg
gaattgcagctgatcgaaagtgacgatccgctggatgctggcctggaaatcctcgcccgt
ccgcccggcaagaagccgcagaccatgacactgctatcgggcggcgaacaggctttgacg
gccatggcgttgatttttgcggtcttcctcaccaatcccgcaccaatctgcgtgctggac
gaggtcgatgccccgctcgacgaccacaatgtcgagcgctattgcaacctgatggacgaa
atggccgcctccacccagacccgtttcgtgatcatcacccacaacccgatcaccatggcc
cgcatgaaccggctgttcggcgtcaccatggccgaacagggcgtctcgcaactggtgtcc
gtggatttgcagacggcggagcaattgcgcgaggctgtgtga
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