Agrobacterium vitis VAT03-9: RvVAT039_25080
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Entry
RvVAT039_25080 CDS
T08809
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_25080
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_25080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
avv02035
]
RvVAT039_25080
Bacterial motility proteins [BR:
avv02035
]
Flagellar system
Chemotaxis proteins
MCPs
RvVAT039_25080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
MCP-like_PDC_1
dCache_1
FUT8_N_cat
HAMP_2
DUF948
CoV_S2
Motif
Other DBs
NCBI-ProteinID:
BCH65292
LinkDB
All DBs
Position
1:complement(2741914..2744100)
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AA seq
728 aa
AA seq
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MKMPVQSVSAKLLLAAGVVITISLGGFSIVGIFATKTQLSDNIVAVATQKAELASRQVTA
DITNVVSSATSVAASLSGLIENGAGSRADVIASLKNIPPQYPSMFGAWMTELPEVPADLK
LQGAEGTNKQGLFTAYWTKDDSGKLGFSTWEIKTTDQWYAEPLATGKSLITQPYISTTGQ
LLTSVSLPVRVNGKIVGLAGVDVKLDDLAATISALRPFEDGRIMLLADNGKWLVNADKSL
MMKDYADTGAAEVKAALADGKTRVIHGLPDGATRIVFPFTSPGMNKTWATVLDIPEKTFT
GPIKEQIIAISSSCLIMLTIGLCLIYFVSTLIVRRPLANVVAGVRVMAGGDYNKPIAGTE
RHDEFGTLATALDQFRRELSNGLRVQQEQDTLRKSVEQDRERQSALEKAKAEDLLQFVQQ
VQAGFNALASGDLTVRMQDNVAPEFEAIRQNFNTSVASLEEAIGAVVHAIGTIRSGLGEI
SAASNDLARRTEQQAASLEETIAALGDVSRAIDGTADGAGRAQTVVTATRDNAAKGGDIV
SRAIEAMTAIQGSSEKIGNIIGVIDEIAFQTNLLALNAGVEAARAGESGKGFAVVAQEVR
ELAQRSANAAREIKALISTSSAQVETGVNLVSASGTSLQQIVDQVANMSSTITDIANSAR
EQATSLREVTNAGDVMDKVTQQNAAMVEETTAAAQNLAQETENLAHMVRRFRTNSANSSQ
PQRYAKAS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccagtgcaatcggtttcagcaaagctcctgctggcggcaggagtcgtgata
acgatctctctgggcggcttctcaattgtcggcatattcgcgaccaaaacccagttgagc
gacaatatcgtcgctgtggcgacgcaaaaggccgagcttgcctcaaggcaggtaaccgca
gatattaccaatgtggtttcctcagcgaccagcgtcgcggccagcctgtcgggattgatt
gaaaacggcgcaggcagccgcgccgatgtcatcgcctcgctgaaaaacattccgccccaa
tatccaagcatgtttggcgcatggatgaccgaattgcctgaggtccccgcggatctaaaa
ctgcaaggcgctgagggcaccaacaaacaaggtctgttcacagcctattggaccaaggac
gacagcggcaagctgggattttccacctgggagatcaaaaccaccgatcaatggtatgcc
gaacctctggcaaccggcaagagcttgattacccagccttatatctcgaccaccggtcag
ttgctgacatcggtatccttgccggtaagggtgaatggcaagattgtcggcctggcgggc
gtcgacgtgaagctggacgatcttgccgcgacaatcagcgccttgcggcccttcgaagat
ggccgcatcatgctgctggccgataacggcaaatggcttgtgaatgccgacaagtccctg
atgatgaaggactatgccgataccggggccgccgaggtcaaggcggcgcttgccgatggc
aagacgcgcgtcatccatggtctgccggatggcgcgacacgcattgtctttccctttacc
agccccggcatgaacaagacctgggccaccgtgctggacattccggaaaagaccttcaca
ggcccgatcaaggaacagatcatcgccatatcctccagttgcctgatcatgctgacgatc
ggtctgtgcctgatttattttgtctcgacgctgatcgtacgccgcccattggcaaatgtg
gtggcaggtgtgcgtgtgatggccggtggcgattacaataaaccgattgcgggaacggag
cgtcacgacgaatttggcaccttggcgacagcactcgaccagttccgacgggaactctcc
aatggcctgcgcgtgcagcaggagcaggacaccttgcgcaaaagcgtggaacaggaccgg
gaacgccagagcgcgctggaaaaggccaaagccgaagatttgctgcaatttgtccagcag
gtccaggctggcttcaatgccctggcctcaggcgatctgaccgtgcgcatgcaggacaat
gttgcaccggaattcgaagcgatccgccagaatttcaatacctcggtggcaagccttgaa
gaagcgatcggcgccgttgttcacgcaattggcacgatccggtccggtcttggcgaaatc
tcggccgcctccaacgatctggcgcggcgcaccgaacagcaggccgcatcgctggaagaa
accattgcagcactcggcgatgtgtcacgcgccatcgacggcacagccgacggggctggc
cgggcgcagacggttgtaaccgccacccgcgacaatgccgccaagggcggagacattgtc
tcccgcgccatcgaggcgatgaccgccatccagggctcatccgaaaagatcggcaatatc
atcggcgtcatcgacgaaattgccttccagaccaatcttctggccctgaatgccggggtg
gaagcggcccgcgccggggaatccggcaagggttttgccgtggtggcgcaggaagtgcgc
gaactcgcccagcgctccgccaatgcggcccgcgaaatcaaggcgctgatctccacctcc
agcgcccaggttgaaaccggggtcaatctcgtcagcgcctcggggacctcgttgcaacag
attgtcgaccaggtcgccaatatgagttcgacaatcacagacattgccaattcagcccgc
gaacaggctacatcgctgcgcgaagtgacgaatgcgggcgatgtcatggacaaggtcacc
cagcagaatgccgccatggtggaagaaaccaccgccgcagcccagaaccttgcccaggaa
accgaaaaccttgctcatatggtccggcgtttccggaccaattccgccaattccagccag
ccccagcgctacgccaaggcgtcgtga
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integrated database retrieval system
