Agrobacterium vitis VAT03-9: RvVAT039_25100
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Entry
RvVAT039_25100 CDS
T08809
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_25100
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RvVAT039_25100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
AAA_10
TrwB_AAD_bind
T2SSE
AAA_16
nSTAND3
DUF5852
AAA_28
Hydrolase
AAA_7
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCH65294
UniProt:
A0AAN1X167
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All DBs
Position
1:2744990..2746573
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AA seq
527 aa
AA seq
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MLEDGKLFLGASRKPDDAFNAPEYLDLKLANRHGLITGATGTGKTVTLQILAEGFASAGV
PVFCADIKGDLSGIAAPGEAKDFLIKRAEEIGLSPYPFEEFPVTFWDLYGEKGHRVRTTI
AEMGPLLLARLMEASEAQEGVLNIAFKIADEGGLALLDLKDLQALLSYMAENSSELSGRF
GLISKSSVGSLQRALLLLESQGADQFFGEPALSIQDIMRVAPDGRGTISVLAADRLMMNP
RLYATFLLWLLSELFEEMPEVGDMAQPKLVFFFDEAHLLFRDAPKVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPETILAQLGNRVQHALRAYTPREQKAVKTAAETFRPNPAFSCEEA
ITALGTGEALVSTLQGKGVPSMVERTLIRPPSARIGPLTDSERTAIIGASPMANLYDRTI
DRHSAFEILAERAEKATGRSGADGRTDDGAEGTSAASRWKLPGFGDEAPEQKTTTTRQAP
DRTAPPGRQRQTVIEAAMKSAARSLASQVANQLGRALVRGILGSLKR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagatggaaaattgtttctcggtgccagccgcaagccggatgatgctttcaac
gcaccggaatatctggatctgaaacttgccaaccgccacggcctcatcaccggcgccacc
ggcaccggcaagaccgtgacgctgcaaatcctggccgaagggttcgccagtgcgggtgtt
ccggtgttctgcgccgacatcaagggcgatctgtcgggcatcgccgcgccgggggaggcc
aaggatttcctgataaagcgcgctgaggagatcgggctttcaccctatcccttcgaggaa
tttccggtcaccttctgggatctctacggcgaaaagggtcatagggtccgcaccaccatc
gccgaaatggggccgcttctgctggcccggctgatggaggcctcggaagcccaggaaggt
gtgctgaacattgccttcaaaatcgccgatgagggtggactggcgctgctggacctcaag
gatctgcaggcgctgctgagctatatggcggaaaattccagtgaattatcgggtcggttc
gggctgatctccaaatcctcggttggctcgctgcaacgggcgctgctgctgctggaaagc
cagggtgccgaccagtttttcggagaaccggcgctgtccatccaggatatcatgcgggtt
gcgccggatgggcgcggcacgatttcggtgctggccgccgaccggttgatgatgaaccca
cggctttatgccacgttcctgctctggctgctgtcagaactgttcgaggaaatgcctgaa
gttggcgatatggctcagcccaaactggtatttttctttgatgaggcgcatctcttgttt
cgcgatgcgccgaaagttcttgtcgagcgggtcgaacaggtggtgcggctgatccgctcc
aagggcgtcggggtctatttcgtcacgcaaaatccgctggatgtgcccgaaaccattctg
gcgcaattgggcaaccgggtgcagcacgcactgcgcgcctatacgccccgcgaacagaag
gcggtgaagactgccgctgaaaccttccggcccaatccggccttttcctgcgaagaggcg
attacggcacttggcaccggtgaggccctggtctcgacccttcagggcaagggtgtgccc
tccatggtcgaacgcaccctgatccgcccgccctccgcccgcattggcccgctgaccgac
agcgagcggacggcaatcatcggcgccagcccgatggcgaacctctacgatcgaaccatc
gaccggcactcggccttcgaaatcctcgcggaacgggccgaaaaagcgactgggcgcagc
ggggccgacggtaggaccgatgacggtgccgaaggcaccagcgccgccagtcgctggaaa
ttgccgggctttggcgatgaagcaccagagcaaaaaaccaccaccacccgccaagcgcct
gaccgcaccgcaccccccggccgccaacgccaaacggtgatcgaagccgcaatgaaaagc
gccgcccgctcgctggccagccaggtcgccaaccagctcggccgggcgctggtccggggg
attcttgggagtttgaaacggtag
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