Agrobacterium vitis VAT03-9: RvVAT039_25970
Help
Entry
RvVAT039_25970 CDS
T08809
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00550
Peptidoglycan biosynthesis
avv01100
Metabolic pathways
avv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RvVAT039_25970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAT039_25970
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
avv01003
]
RvVAT039_25970
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
RvVAT039_25970
Enzymes [BR:
avv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RvVAT039_25970
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RvVAT039_25970
Glycosyltransferases [BR:
avv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RvVAT039_25970
Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RvVAT039_25970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BCH65381
LinkDB
All DBs
Position
1:complement(2834524..2836647)
Genome browser
AA seq
707 aa
AA seq
DB search
MQKKKRHIFLKLDAWLDSTLWNTGFQAAEFWEETTIFFRRFRMRGWKKWLFEALGEAMTL
GTAGAVVMLALAMPAFQETVKDWRNRGDFAVTFLDRYGNVIGHRGIIHENSVPFEDLPDN
LIKAVLATEDRRFFDHFGIDFIGLGRALSENARAGGVVQGGSTLTQQLAKNLFLTNERSI
ERKIKEAFLSLWLEANLSKQEILSLYLDRAYMGGGTFGAAAASQFYFGKSVRDVNLAEAA
MLAGLFKAPAKYAPHVNLPAARGRANEVLSNLVQSGFMSEGQVIAARRNPATVVDRAERE
APDFFLDWAFDEVQRIASRFPEHSLIVRTTIDPGLQKVAETAVSNTLREYGEQYNVKQAA
LVTLENGGAVRAMVGGRDYGESQFNRATRGLRQPGSSFKIYTYAVAMEAGLTPETTIVDG
PVNWGNWSPHNYGNSYAGRITLTTALAKSINTVPVRLVKDRLGVDSVIRMAKAMGVETPI
RKDVTIPLGTSEVTVMDQATAYAVLPSGGLQSRRHGIVDVRDYRGHVLYDFDRDEPAPRR
VLTEQADGYMNQMLTKVPYIGTGRKAALDGILTAGKSGTTQAYRDAWFVGYTGNFTTAVW
FGNDDYTSTNNMTGGSLPAMTFKTIMDYAHQGVAVRPIPGVLEPATVAVKAPAPAKGEPK
GTAPAPTPPEFVRPRTLSVETTALLRQIGTMLTEAQPLAPALRAALD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaaagcggcatatctttctcaaactcgacgcctggctggattccacctta
tggaataccggcttccaggccgccgaattctgggaagaaaccacgatcttctttcgccgg
tttcggatgcgcggttggaagaaatggctgttcgaggccctgggcgaagcgatgacgctg
ggaaccgccggtgccgtggtgatgctggcgctggccatgcccgcctttcaggaaacggtc
aaggattggcgcaatcgcggcgattttgccgtcacctttctggatcgctacggcaatgtc
atcggccatcgcggcattatccatgaaaattccgtgccgttcgaagacctgcccgacaat
ctgatcaaggcggtgctggccaccgaagaccggcggtttttcgaccatttcggcatcgat
ttcatcggccttggccgggcgctcagcgaaaatgccagagctggcggcgtggtccaaggc
ggctcgacgctgacccagcagctcgccaagaacctgtttctcaccaatgagcgctccatc
gagcgcaagatcaaggaagccttcctgtcgctatggctggaggccaatctgtcgaaacag
gaaatcctgtcactctatctcgaccgcgcctatatgggcggcggcacattcggcgcggcg
gcggcctcgcaattctacttcggcaagagcgtgcgcgacgtcaatctggccgaggccgcc
atgctggcgggcctgttcaaggcgccggccaaatatgcgccgcatgtcaacctgcccgcc
gcccgtggccgcgccaatgaagtgttgagcaatctggtgcaaagcggcttcatgagcgag
ggccaggtgattgctgcccggcgcaatccggccaccgtggttgatcgggccgagcgcgag
gcaccggacttctttctcgactgggcgtttgacgaggtgcaacgcatcgcctctcgcttc
cccgaacattcgctgatcgtgcgcaccaccatcgatcccggcctgcaaaaagtcgccgaa
accgctgttagcaacacgctgcgtgaatatggcgagcaatataatgtcaagcaggcggcc
ctcgtgacgctggaaaacggcggtgcggtgcgcgccatggtcggcggacgcgactacggc
gaaagccagttcaaccgcgccacgcgcggcctgcgccaacccggttcctccttcaagatc
tacacctatgcggtggcgatggaagcgggcctgaccccggagaccaccattgtcgatggt
ccggtcaattggggcaattggagcccgcataattacggcaacagctatgccgggcgcatt
acgctgacgaccgcgctggccaaatcgatcaacaccgtaccagtgaggctggtcaaggac
cggctgggcgttgattccgtcatccgcatggcgaaagccatgggcgtggaaaccccgatc
cgtaaagatgtcaccattccgctcggcacctcggaagtgaccgtcatggaccaggcgacg
gcctatgccgtgctgccatccgggggcctgcaatcacgccgccatggcattgtcgatgtc
agagactatcgcggccatgtgctctacgatttcgaccgtgacgaaccggccccgcgccgg
gtgctgaccgagcaggccgatggttacatgaaccagatgctgaccaaggtcccctatatc
ggcacgggccgcaaagccgccctggacggcattctgactgccggcaagagcggcacgacg
caggcctaccgcgatgcctggttcgtcggctataccggcaatttcacaaccgctgtctgg
ttcggcaatgacgattacacctccaccaacaacatgaccggcggctcgcttccagccatg
accttcaaaaccatcatggactacgcccaccaaggcgtggccgtccggccaatccccggc
gtactggaaccggcaaccgtggccgtcaaagccccagcaccggccaagggcgaaccaaag
ggcaccgcacccgcccccaccccacccgaattcgtccgcccccggacactctctgtcgaa
accaccgccctgctgcgccagatcggcacgatgctgaccgaggcacagccgctggcgcca
gcgctgcgggcggcgctggattga
DBGET
integrated database retrieval system
