Agrobacterium vitis VAT03-9: RvVAT039_26340
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Entry
RvVAT039_26340 CDS
T08809
Symbol
dop
Name
(GenBank) serine peptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv01503
Cationic antimicrobial peptide (CAMP) resistance
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_26340 (dop)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RvVAT039_26340 (dop)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avv01002
]
RvVAT039_26340 (dop)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
avv03110
]
RvVAT039_26340 (dop)
Enzymes [BR:
avv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
RvVAT039_26340 (dop)
Peptidases and inhibitors [BR:
avv01002
]
Serine peptidases
Family S1: chymotrypsin family
RvVAT039_26340 (dop)
Chaperones and folding catalysts [BR:
avv03110
]
Other chaperones and cochaperones
DegP / HtrA
RvVAT039_26340 (dop)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ
PDZ_6
Trypsin
DUF3394
Tricorn_PDZ
PDZ_1
DUF6288
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
BCH65418
LinkDB
All DBs
Position
1:2867869..2869419
Genome browser
AA seq
516 aa
AA seq
DB search
MSKSFHNRSVTSRLRAGTAAGLAALMLAGAVTVTPALAAPVEVQAPQVPSFADLVSAVSP
AVVSIRVKSDVQQASEDGSNFSFNGRDFDQLPDPLKRFFKEWGMPGPGGPGGPGGPKGGP
HAERHGKLRPIAQGSGFFISEDGYVVTNNHVVSDGQAYTVVMNDGTEYDAKLVGKDPRTD
LAVLKVDQPTKKFTYVEWAQDEKIRVGDWVVAVGNPFGLGGTVTSGIVSAFGRDIGSGPY
DDYIQIDAPVNRGNSGGPDFNLSGKVVGINTAIFSPSGGSVGIAFAIPAATAKDVVAELI
KHGSVQRGWLGVQIQPVTKDIAESLGLADAKGALVAEPQTGSPGEKAGIKQGDVITAVNG
DPVKDPRDLAKRIAAFPPNTKVDISIWRNGKPTAVKVDLGTLPAEKDTASGDEDQGAPEQ
NAPATEQALANLGVTVQRADDGKGLTITNVDPDSDAADKGLKTGQKITSVNNQQVSSAAE
VKKILEQAKKDGRTKALFQVETDNGSRFIALPINQG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatccttccataatcgctccgttacctccaggctgcgggcaggcaccgcggca
gggctggcggccctgatgctggcgggtgccgtgacggtaacgcctgcgctggccgcgccc
gtcgaggttcaggcgccgcaggtgccaagctttgccgatctggtcagtgccgtttcgccc
gccgtcgtctccatccgcgtcaaatcggatgttcagcaggcctccgaggacggcagcaat
ttctccttcaatggccgtgacttcgaccagcttcccgatccgctgaagcgcttcttcaag
gaatggggcatgccaggccccggcggtccgggtggtccaggaggccccaagggcggaccg
catgccgagcgtcatggcaagctgcgtccgattgcccaggggtcgggcttcttcatctcc
gaggacggctatgtcgtgaccaacaatcacgtggtttccgatggccaggcctatacagtg
gtgatgaatgacggcaccgaatatgatgccaagctggtcggtaaggacccgcgcactgac
cttgccgttttgaaggtcgatcagccgaccaagaaattcacctatgtcgaatgggcgcag
gacgagaagatccgcgttggtgactgggtcgttgccgtcggcaatcctttcggtctcggc
ggaaccgtgacctcgggcatcgtctcggcctttggccgcgatatcggctccggtccttat
gacgattacatccagatcgacgcaccggtaaaccgaggcaattcgggtgggccggacttc
aacctcagcggcaaggtggtcgggatcaacacggcgatcttctcgccatcgggcggtagc
gtcggcatcgccttcgctattccggcggcgactgccaaggacgtggttgctgaattgatc
aagcatggctcggtgcagcgcggctggcttggcgtgcagatccagcccgtcaccaaggat
attgcggaatcgcttggtcttgccgatgccaagggcgcactggtggctgagccgcaaacc
ggttctcccggtgaaaaggccggtatcaagcagggcgacgtgattaccgctgtgaatggc
gatccggtcaaggacccgcgtgacctcgccaagcgcattgctgccttcccgcccaatacc
aaggtcgatatttctatctggcgcaatggcaagccgactgccgtcaaggtcgatctcggc
accctgcctgctgaaaaggatacggccagcggtgatgaggaccagggcgcgcccgagcag
aacgcaccggccaccgagcaggcgcttgccaatctcggagtcactgtccagcgtgccgat
gacggcaagggcctgacgatcaccaatgtcgatccggattccgacgctgccgacaagggg
ctgaagacgggccagaagatcacgtccgttaacaaccagcaggtctccagcgccgccgag
gtcaagaagatcctggagcaggccaagaaggacggtcgcaccaaggcgctcttccaggtg
gaaaccgacaatggcagccgcttcatcgccctgccgatcaaccagggctga
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