Agrobacterium vitis VAT03-9: RvVAT039_26590
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Entry
RvVAT039_26590 CDS
T08809
Symbol
oppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv01501
beta-Lactam resistance
avv02010
ABC transporters
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_26590 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_26590 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RvVAT039_26590 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_26590 (oppD)
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RvVAT039_26590 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_22
AAA_29
AAA_16
nSTAND3
nSTAND1
DUF87
AAA_23
NACHT
AAA_13
RsgA_GTPase
MMR_HSR1
FtsK_SpoIIIE
PRK
AAA_19
ABC_ATPase
AAA_15
SbcC_Walker_B
AAA_33
MobB
NB-ARC
AAA
AAA_18
APS_kinase
DUF2813
MeaB
Motif
Other DBs
NCBI-ProteinID:
BCH65443
LinkDB
All DBs
Position
1:complement(2903848..2905452)
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AA seq
534 aa
AA seq
DB search
MDKTENQTVLTVKDLKVTFTTPDGEVNAVKGISFDVKKGETLAIVGESGSGKSQTMMGIM
GLLASNGQVAGSARYGETELAGASISTLNDVRGSKITMIFQEPMTSLDPLYTVGKQISEP
LIFHRRMSRSKARARVLELLKLVGIPEPERRIDSYPHELSGGQRQRVMIAMALANEPDLL
IADEPTTALDVTIQAQILDLLADLQKRFGMAIVLITHDLGVVKHVADRVAVMRRGEIVEQ
GSRDDIFERPQADYTKMLLAAEPSGSKAAPPSDAPVILEGRNVVVDFNISSGILFKGNRK
FRAVDHVNLKLRQSQTIGIVGESGSGKSTLGRALLKLLSADGRFSFETTDISGLDRAGMR
PFRRQLQLVFQDPYGSLSPRQTVGEIITEGLYVHEPNLSKAERDKRAIAALKEVGLDPAS
RNRYPHEFSGGQRQRIAIARSMILKPKVVILDEPTSALDRSVQRQVIELLRDLQQKHDLS
YVFISHDLSVIKAISDHVIVMKNGKIVEEGPTEDIFESPAEDYTKALIAAAFTH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaccgaaaaccagacggtgctgaccgtcaaggacctgaaggtcacattcacc
acgcccgatggcgaggtgaatgccgtcaagggcatttccttcgatgtcaagaaaggtgaa
acgctggccatcgtcggtgaatccggctccggcaaaagccagacgatgatgggcattatg
gggctgctggcctcgaatggacaggtggcaggctcggcccgctacggcgaaaccgaactg
gcaggcgccagcatctcaacgctgaacgacgtgcgcggctcgaagatcaccatgatcttt
caagagccgatgacctcgctcgatccgctctacacggtcggcaagcagatttccgagccg
ttaatttttcatcgccgcatgagccggtcgaaggcgcgcgcccgcgtgctggaactgctc
aagctggtcggcatcccggaaccggagcgtcggatcgacagctatccgcacgaattgtcc
ggcggccagcgccagcgcgtgatgatcgccatggcgctcgccaacgagccggacctgctg
atcgccgacgagccaaccacggcgctcgacgtgacgatccaggcgcagatcctcgatctt
ctcgccgatttgcaaaagcgcttcggcatggccatcgtgttgatcacccacgacctcggt
gtggtcaagcatgttgccgaccgcgtggcggtgatgcggcgcggcgagatagtcgaacag
ggcagccgggacgatatttttgagcgtcctcaagctgattataccaaaatgctgctagcc
gccgaaccatcaggttccaaggccgcaccgccctccgatgcaccggttatcctcgaaggc
cgcaatgtcgtggtggatttcaacatcagctccggcatcctgttcaaaggcaatcgaaag
ttccgggccgtcgatcatgtcaatctgaagcttcgccagagccaaaccattggcattgtc
ggcgaatccggttcgggcaaatccacgctgggacgggcgctgctgaagctgctctccgcc
gatggccggttcagcttcgaaaccacggatatttccggcctcgaccgcgctgggatgcgt
cccttccgccgtcaattgcagctggtatttcaagacccctacggctcgctctcgccacgc
cagacggttggcgagattatcaccgaagggctttacgtgcatgaaccgaaccttagcaaa
gcggagcgcgacaagcgcgccattgccgccttgaaggaagtcggcctcgatccggcctcg
cgcaatcgctatccgcatgaattttccggcggccagcgtcagcgtatcgccatcgcccgc
tcgatgatcctaaagccgaaagtggtaatcctcgatgaaccgacctcagccctggaccgt
tcggtgcagcggcaggtgatcgagttgctacgtgacctgcaacagaaacacgacctgtcc
tacgtgttcatcagccacgacctgtcggtgatcaaggcaatttccgaccatgtgatcgtg
atgaagaacggaaagatcgttgaagaagggccgacggaagacattttcgaaagccccgcc
gaggactataccaaggccctgattgcggctgcgtttacgcattga
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